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5OM3

Crystal structure of Alpha1-antichymotrypsin variant DBS-I5: a MMP14-cleavable drug-binding serpin for doxycycline

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004867molecular_functionserine-type endopeptidase inhibitor activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0006953biological_processacute-phase response
A0006954biological_processinflammatory response
A0019216biological_processregulation of lipid metabolic process
A0030277biological_processmaintenance of gastrointestinal epithelium
A0031093cellular_componentplatelet alpha granule lumen
A0034774cellular_componentsecretory granule lumen
A0035578cellular_componentazurophil granule lumen
A0062023cellular_componentcollagen-containing extracellular matrix
A0070062cellular_componentextracellular exosome
A0072562cellular_componentblood microparticle
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue PEG A 401
ChainResidue
ASER36
ALYS81
ALEU127
AASP128
AARG129
AHOH627

site_idAC2
Number of Residues10
Detailsbinding site for residue DXT B 501
ChainResidue
AASP278
BHIS383
BTRP386
BHOH602
BHOH610
BHOH612
BHOH616
ALEU273
ASER274
APHE277

Functional Information from PROSITE/UniProt
site_idPS00284
Number of Residues11
DetailsSERPIN Serpins signature. VRFNRPFLMiI
ChainResidueDetails
BVAL370-ILE380

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsDNA_BIND:
ChainResidueDetails
ALYS212-LYS214

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Reactive bond
ChainResidueDetails
ASER360

site_idSWS_FT_FI3
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952
ChainResidueDetails
AASN10
AASN163

site_idSWS_FT_FI4
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:12754519, ECO:0000269|PubMed:14760718, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN70

site_idSWS_FT_FI5
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:12754519, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN83

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN104
AASN248

227344

PDB entries from 2024-11-13

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