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5OK4

Crystal structure of native [Fe]-hydrogenase Hmd from Methanothermobacter marburgensis inactivated by O2.

Functional Information from GO Data
ChainGOidnamespacecontents
A0006730biological_processone-carbon metabolic process
A0015948biological_processmethanogenesis
A0016491molecular_functionoxidoreductase activity
A0019386biological_processmethanogenesis, from carbon dioxide
A0047068molecular_functionN5,N10-methenyltetrahydromethanopterin hydrogenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue FE A 401
ChainResidue
ACYS172
AASP189
AHIS203
AFEG404

site_idAC2
Number of Residues4
Detailsbinding site for residue FE A 402
ChainResidue
AHIS187
AGLY249
ACYS252
ACYS255

site_idAC3
Number of Residues6
Detailsbinding site for residue FE A 403
ChainResidue
AASP153
AASP153
AHOH871
AHOH871
AHOH871
AASP153

site_idAC4
Number of Residues29
Detailsbinding site for residue FEG A 404
ChainResidue
ALEU6
AGLY7
AGLY9
ACYS10
ATHR13
AHIS14
AALA62
AASP63
APRO64
APRO110
APRO111
AASP131
ATRP144
APHE145
APRO146
AILE154
AALA171
ACYS172
AASP189
AHIS203
AFE401
AHOH546
AHOH560
AHOH563
AHOH578
AHOH659
AHOH701
AHOH807
AHOH820

site_idAC5
Number of Residues3
Detailsbinding site for residue GOL A 405
ChainResidue
AVAL276
AHOH520
AHOH543

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PDB entries from 2024-07-17

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