5O9U

HsNMT1 in complex with CoA and Myristoylated-GCSVSKKK octapeptide

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004379	molecular_function	glycylpeptide N-tetradecanoyltransferase activity
A	0006499	biological_process	N-terminal protein myristoylation
B	0004379	molecular_function	glycylpeptide N-tetradecanoyltransferase activity
B	0006499	biological_process	N-terminal protein myristoylation

Functional Information from PDB Data

site_id	AC1
Number of Residues	23
Details	binding site for residue COA A 501

Chain	Residue
A	TYR117
A	VAL250
A	ARG255
A	SER256
A	ARG258
A	ALA260
A	PRO261
A	ALA283
A	LEU287
A	HOH602
A	HOH677
A	GLN118
A	HOH812
A	HOH823
C	GLY2
C	MYR101
A	PHE119
A	TRP120
A	ASN179
A	TYR180
A	VAL181
A	LEU248
A	CYS249

---

site_id	AC2
Number of Residues	8
Details	binding site for residue GOL A 502

Chain	Residue
A	LYS289
A	PRO290
A	VAL291
A	LEU478
A	TRP481
A	LYS482
A	CYS483
A	HOH640

---

site_id	AC3
Number of Residues	23
Details	binding site for residue COA B 501

Chain	Residue
B	TYR117
B	GLN118
B	PHE119
B	TRP120
B	ASN179
B	TYR180
B	VAL181
B	LEU248
B	CYS249
B	VAL250
B	ARG255
B	SER256
B	ARG258
B	VAL259
B	ALA260
B	PRO261
B	THR282
B	ALA283
B	LEU287
B	HOH756
B	HOH794
D	GLY2
D	MYR101

---

site_id	AC4
Number of Residues	9
Details	binding site for residue GOL B 502

Chain	Residue
B	PRO126
B	LYS289
B	VAL291
B	TYR477
B	LEU478
B	TRP481
B	LYS482
B	CYS483
B	HOH605

---

site_id	AC5
Number of Residues	8
Details	binding site for residue GOL B 503

Chain	Residue
B	GLU244
B	PRO364
B	MET366
B	TRP374
B	TYR423
B	VAL494
B	GLN496
B	HOH775

---

site_id	AC6
Number of Residues	15
Details	binding site for Di-peptide MYR E 101 and GLY E 2

Chain	Residue
A	TRP120
A	TYR180
A	ASN246
A	PHE247
A	LEU248
A	THR268
A	VAL271
A	PHE277
A	TYR281
A	THR282
A	ALA283
A	TYR479
A	COA501
A	HOH734
C	CYS3

---

site_id	AC7
Number of Residues	18
Details	binding site for Di-peptide MYR F 101 and GLY F 2

Chain	Residue
B	TYR479
B	COA501
B	HOH666
B	HOH759
D	CYS3
B	TRP120
B	TYR180
B	ASN246
B	PHE247
B	LEU248
B	THR268
B	VAL271
B	PHE277
B	GLN278
B	ALA279
B	TYR281
B	THR282
B	ALA283

---

Functional Information from PROSITE/UniProt

site_id	PS00975
Number of Residues	9
Details	NMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EINFLCvHK

Chain	Residue	Details
A	GLU244-LYS252

---

site_id	PS00976
Number of Residues	7
Details	NMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGiGDG

Chain	Residue	Details
A	LYS466-GLY472

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"25255805","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32111831","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"SEP-2009","submissionDatabase":"PDB data bank","title":"Crystal structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90055.","authoringGroup":["Structural genomics consortium (SGC)"]}}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	10
Details	Binding site: {"evidences":[{"source":"PubMed","id":"25255805","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32103017","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32111831","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"SEP-2009","submissionDatabase":"PDB data bank","title":"Crystal structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90055.","authoringGroup":["Structural genomics consortium (SGC)"]}}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"32103017","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"25255805","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"SEP-2009","submissionDatabase":"PDB data bank","title":"Crystal structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90055.","authoringGroup":["Structural genomics consortium (SGC)"]}}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Lipidation: {"description":"N-myristoyl glycine","evidences":[{"source":"PubMed","id":"11006339","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18502848","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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