5O96
Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006364 | biological_process | rRNA processing |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| A | 0070475 | biological_process | rRNA base methylation |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006364 | biological_process | rRNA processing |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| B | 0070475 | biological_process | rRNA base methylation |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006364 | biological_process | rRNA processing |
| C | 0008168 | molecular_function | methyltransferase activity |
| C | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| C | 0070475 | biological_process | rRNA base methylation |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006364 | biological_process | rRNA processing |
| D | 0008168 | molecular_function | methyltransferase activity |
| D | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| D | 0070475 | biological_process | rRNA base methylation |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0006364 | biological_process | rRNA processing |
| E | 0008168 | molecular_function | methyltransferase activity |
| E | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| E | 0070475 | biological_process | rRNA base methylation |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006364 | biological_process | rRNA processing |
| F | 0008168 | molecular_function | methyltransferase activity |
| F | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| F | 0070475 | biological_process | rRNA base methylation |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0006364 | biological_process | rRNA processing |
| G | 0008168 | molecular_function | methyltransferase activity |
| G | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| G | 0070475 | biological_process | rRNA base methylation |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0006364 | biological_process | rRNA processing |
| H | 0008168 | molecular_function | methyltransferase activity |
| H | 0070042 | molecular_function | rRNA (uridine-N3-)-methyltransferase activity |
| H | 0070475 | biological_process | rRNA base methylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 20 |
| Details | binding site for residue SAM A 501 |
| Chain | Residue |
| A | LEU173 |
| A | GLY220 |
| A | ARG222 |
| A | VAL223 |
| A | LEU224 |
| A | ARG225 |
| A | THR226 |
| A | ALA229 |
| A | HOH602 |
| A | HOH623 |
| A | HOH624 |
| A | HIS174 |
| A | HOH633 |
| A | PRO175 |
| A | GLY196 |
| A | PRO197 |
| A | GLU198 |
| A | GLY200 |
| A | SER218 |
| A | LEU219 |
| site_id | AC2 |
| Number of Residues | 17 |
| Details | binding site for residue SAM B 501 |
| Chain | Residue |
| B | LEU173 |
| B | HIS174 |
| B | PRO175 |
| B | GLY196 |
| B | PRO197 |
| B | GLU198 |
| B | GLY199 |
| B | GLY200 |
| B | LEU217 |
| B | SER218 |
| B | LEU219 |
| B | GLY220 |
| B | ARG222 |
| B | LEU224 |
| B | ALA229 |
| B | HOH601 |
| B | HOH663 |
| site_id | AC3 |
| Number of Residues | 13 |
| Details | binding site for residue SAM C 501 |
| Chain | Residue |
| C | LEU173 |
| C | HIS174 |
| C | GLY196 |
| C | PRO197 |
| C | GLU198 |
| C | GLY199 |
| C | GLY200 |
| C | LEU217 |
| C | SER218 |
| C | LEU219 |
| C | GLY220 |
| C | ARG222 |
| C | LEU224 |
| site_id | AC4 |
| Number of Residues | 16 |
| Details | binding site for residue SAM D 501 |
| Chain | Residue |
| C | ARG4 |
| D | LEU173 |
| D | HIS174 |
| D | GLY196 |
| D | PRO197 |
| D | GLU198 |
| D | GLY199 |
| D | GLY200 |
| D | LEU217 |
| D | SER218 |
| D | LEU219 |
| D | GLY220 |
| D | ARG222 |
| D | VAL223 |
| D | LEU224 |
| D | ALA229 |
| site_id | AC5 |
| Number of Residues | 17 |
| Details | binding site for residue SAM E 501 |
| Chain | Residue |
| E | LEU173 |
| E | HIS174 |
| E | PRO175 |
| E | GLY196 |
| E | PRO197 |
| E | GLU198 |
| E | PHE201 |
| E | SER218 |
| E | LEU219 |
| E | GLY220 |
| E | ARG222 |
| E | VAL223 |
| E | LEU224 |
| E | ARG225 |
| E | THR226 |
| E | HOH615 |
| F | GLN143 |
| site_id | AC6 |
| Number of Residues | 13 |
| Details | binding site for residue SAM F 501 |
| Chain | Residue |
| E | GLN143 |
| F | LEU173 |
| F | HIS174 |
| F | GLU198 |
| F | LEU217 |
| F | SER218 |
| F | LEU219 |
| F | GLY220 |
| F | ARG222 |
| F | VAL223 |
| F | LEU224 |
| F | ARG225 |
| F | ALA229 |
| site_id | AC7 |
| Number of Residues | 17 |
| Details | binding site for residue SAM G 501 |
| Chain | Residue |
| G | PRO197 |
| G | GLU198 |
| G | LEU217 |
| G | SER218 |
| G | LEU219 |
| G | GLY220 |
| G | ARG222 |
| G | VAL223 |
| G | LEU224 |
| G | ARG225 |
| G | THR226 |
| G | GLU227 |
| G | ALA229 |
| G | HOH601 |
| G | LEU173 |
| G | HIS174 |
| G | GLY196 |
| site_id | AC8 |
| Number of Residues | 14 |
| Details | binding site for residue SAM H 501 |
| Chain | Residue |
| H | LEU173 |
| H | HIS174 |
| H | PRO175 |
| H | GLY196 |
| H | PRO197 |
| H | GLU198 |
| H | GLY200 |
| H | LEU217 |
| H | SER218 |
| H | LEU219 |
| H | GLY220 |
| H | ARG222 |
| H | LEU224 |
| H | ALA229 |
