5O6M
Structure of Polyphosphate Kinase from Meiothermus ruber N121D bound to ATP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006797 | biological_process | polyphosphate metabolic process |
| A | 0008976 | molecular_function | polyphosphate kinase activity |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016776 | molecular_function | phosphotransferase activity, phosphate group as acceptor |
| B | 0006797 | biological_process | polyphosphate metabolic process |
| B | 0008976 | molecular_function | polyphosphate kinase activity |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016776 | molecular_function | phosphotransferase activity, phosphate group as acceptor |
| C | 0006797 | biological_process | polyphosphate metabolic process |
| C | 0008976 | molecular_function | polyphosphate kinase activity |
| C | 0016301 | molecular_function | kinase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016776 | molecular_function | phosphotransferase activity, phosphate group as acceptor |
| D | 0006797 | biological_process | polyphosphate metabolic process |
| D | 0008976 | molecular_function | polyphosphate kinase activity |
| D | 0016301 | molecular_function | kinase activity |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016776 | molecular_function | phosphotransferase activity, phosphate group as acceptor |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 15 |
| Details | binding site for residue ATP A 1001 |
| Chain | Residue |
| A | LYS70 |
| A | VAL130 |
| A | HOH1123 |
| A | HOH1148 |
| A | HOH1165 |
| A | HOH1170 |
| A | HOH1188 |
| A | PHE91 |
| A | GLY92 |
| A | VAL93 |
| A | PRO94 |
| A | ARG106 |
| A | ARG122 |
| A | GLU126 |
| A | ASP127 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 A 1002 |
| Chain | Residue |
| A | ALA67 |
| A | GLY68 |
| A | GLY69 |
| A | LYS70 |
| A | ASP71 |
| A | ARG182 |
| A | HOH1139 |
| A | HOH1165 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 A 1003 |
| Chain | Residue |
| A | GLN97 |
| A | ARG101 |
| A | HOH1179 |
| B | ARG113 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue PO4 A 1004 |
| Chain | Residue |
| A | ARG132 |
| A | ARG215 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 A 1005 |
| Chain | Residue |
| A | ASN232 |
| A | TRP233 |
| A | HOH1112 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 A 1006 |
| Chain | Residue |
| A | ARG182 |
| A | LYS188 |
| A | LYS191 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 A 1007 |
| Chain | Residue |
| A | LYS231 |
| A | TRP233 |
| A | HOH1112 |
| A | HOH1181 |
| B | LYS231 |
| B | PO4306 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 A 1008 |
| Chain | Residue |
| A | ARG75 |
| A | ASN232 |
| A | ARG235 |
| site_id | AC9 |
| Number of Residues | 16 |
| Details | binding site for residue ATP B 301 |
| Chain | Residue |
| B | LYS70 |
| B | PHE91 |
| B | GLY92 |
| B | VAL93 |
| B | PRO94 |
| B | ARG106 |
| B | ARG122 |
| B | GLU126 |
| B | ASP127 |
| B | VAL130 |
| B | ARG193 |
| B | HOH418 |
| B | HOH447 |
| B | HOH468 |
| B | HOH474 |
| B | HOH484 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 B 302 |
| Chain | Residue |
| B | ALA67 |
| B | GLY68 |
| B | GLY69 |
| B | LYS70 |
| B | ASP71 |
| B | ARG182 |
| B | HOH402 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 B 303 |
| Chain | Residue |
| A | ARG113 |
| B | GLN97 |
| B | ARG101 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 B 304 |
| Chain | Residue |
| B | LYS29 |
| B | ASN232 |
| B | TRP233 |
| B | HOH401 |
| site_id | AD4 |
| Number of Residues | 5 |
| Details | binding site for residue PO4 B 305 |
| Chain | Residue |
| B | ARG75 |
| B | ASN232 |
| B | ARG235 |
| B | PO4307 |
| B | HOH426 |
| site_id | AD5 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 B 306 |
| Chain | Residue |
| A | LYS231 |
| A | PO41007 |
| B | LYS231 |
| B | TRP233 |
| site_id | AD6 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 B 307 |
| Chain | Residue |
| B | ARG182 |
| B | LYS188 |
| B | LYS191 |
| B | PO4305 |
| site_id | AD7 |
| Number of Residues | 10 |
| Details | binding site for residue ATP C 1001 |
| Chain | Residue |
| C | LYS70 |
| C | PHE91 |
| C | GLY92 |
| C | VAL93 |
| C | PRO94 |
| C | ARG106 |
| C | ARG122 |
| C | GLU126 |
| C | ASP127 |
| C | ARG193 |
| site_id | AD8 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 C 1002 |
| Chain | Residue |
| C | GLY69 |
| C | LYS70 |
| C | ASP71 |
| C | ARG182 |
| C | ALA67 |
| C | GLY68 |
| site_id | AD9 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 C 1003 |
| Chain | Residue |
| C | GLN97 |
| C | ARG101 |
| D | ARG113 |
| site_id | AE1 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 C 1004 |
| Chain | Residue |
| C | LYS29 |
| C | ASN232 |
| C | TRP233 |
| site_id | AE2 |
| Number of Residues | 13 |
| Details | binding site for residue ATP D 1001 |
| Chain | Residue |
| D | LYS70 |
| D | ASP71 |
| D | PHE91 |
| D | GLY92 |
| D | VAL93 |
| D | PRO94 |
| D | ARG106 |
| D | ARG122 |
| D | GLU126 |
| D | ASP127 |
| D | VAL130 |
| D | ARG193 |
| D | HOH1122 |
| site_id | AE3 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 D 1002 |
| Chain | Residue |
| D | ALA67 |
| D | GLY68 |
| D | GLY69 |
| D | LYS70 |
| D | ASP71 |
| D | ARG182 |
| site_id | AE4 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 D 1003 |
| Chain | Residue |
| D | ARG132 |
| D | ALA212 |
| D | ARG215 |
| D | HOH1101 |
| site_id | AE5 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 D 1004 |
| Chain | Residue |
| D | ARG75 |
| D | LYS188 |
| D | LYS191 |
| D | PO41006 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 D 1005 |
| Chain | Residue |
| D | LYS29 |
| D | ASN232 |
| D | TRP233 |
| site_id | AE7 |
| Number of Residues | 5 |
| Details | binding site for residue PO4 D 1006 |
| Chain | Residue |
| D | GLY72 |
| D | ARG75 |
| D | ASN232 |
| D | ARG235 |
| D | PO41004 |
| site_id | AE8 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 D 1007 |
| Chain | Residue |
| C | ARG113 |
| D | GLN97 |
| D | ARG101 |
