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5O4P

Crystal structure of AMPylated GRP78

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0140662molecular_functionATP-dependent protein folding chaperone
B0005524molecular_functionATP binding
B0140662molecular_functionATP-dependent protein folding chaperone
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 A 601
ChainResidue
AASN59
AARG60
AILE61
AASN457
AHOH735
AHOH904

site_idAC2
Number of Residues10
Detailsbinding site for residue SO4 A 602
ChainResidue
AGLY226
AGLY227
AGLY228
AALA229
AHOH701
AHOH746
AHOH828
ATHR37
ALYS96
AGLU201

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 603
ChainResidue
ALYS287
AARG290
AILE309
AGLU310
ASER311

site_idAC4
Number of Residues6
Detailsbinding site for residue SO4 A 604
ChainResidue
AGLN182
ALYS185
AARG532
AHOH731
AHOH781
AHOH804

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 605
ChainResidue
AASN528
AHOH842

site_idAC6
Number of Residues6
Detailsbinding site for residue SO4 B 602
ChainResidue
BASN59
BARG60
BILE61
BASN457
BHOH766
BHOH814

site_idAC7
Number of Residues12
Detailsbinding site for residue SO4 B 603
ChainResidue
BGLY36
BTHR37
BLYS96
BGLU201
BGLY226
BGLY227
BGLY228
BALA229
BHOH719
BHOH728
BHOH844
BHOH901

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 B 604
ChainResidue
BGLN182
BLYS185
BARG532
BHOH735
BHOH739

site_idAC9
Number of Residues3
Detailsbinding site for residue SO4 B 605
ChainResidue
BASN528
BHOH787
BHOH829

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 B 606
ChainResidue
ALYS474
BASP333
BARG336
BHOH704

site_idAD2
Number of Residues3
Detailsbinding site for residue SO4 B 607
ChainResidue
BGLN302
BHIS303
BGLN304

site_idAD3
Number of Residues3
Detailsbinding site for residue SO4 B 608
ChainResidue
BGLN302
BALA305
BARG306

site_idAD4
Number of Residues7
Detailsbinding site for residue SO4 B 609
ChainResidue
BILE388
BASN389
BGLU392
BALA393
BTYR396
BPRO491
BHOH885

site_idAD5
Number of Residues3
Detailsbinding site for Di-peptide AMP B 601 and THR B 518
ChainResidue
BGLY517
BGLY519
BASN520

Functional Information from PROSITE/UniProt
site_idPS00297
Number of Residues8
DetailsHSP70_1 Heat shock hsp70 proteins family signature 1. IDLGTTyS
ChainResidueDetails
AILE33-SER40

site_idPS00329
Number of Residues14
DetailsHSP70_2 Heat shock hsp70 proteins family signature 2. VFDLGGGAfdvSLL
ChainResidueDetails
AVAL222-LEU235

site_idPS01036
Number of Residues15
DetailsHSP70_3 Heat shock hsp70 proteins family signature 3. IvLvGGsTRIPkIqQ
ChainResidueDetails
AILE359-GLN373

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:29064368, ECO:0000312|PDB:6EOE, ECO:0000312|PDB:6EOF
ChainResidueDetails
AGLY36
AGLY227
AGLU293
AGLY364
BGLY36
BGLY227
BGLU293
BGLY364

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P11021
ChainResidueDetails
ALYS96
BLYS96

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P06761
ChainResidueDetails
ASER86
BSER86

site_idSWS_FT_FI4
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS125
ALYS213
ALYS326
BLYS125
BLYS213
BLYS326

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: 3'-nitrotyrosine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ATYR160
BTYR160

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P0DMV8
ChainResidueDetails
ALYS271
BLYS271

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS353
BLYS353

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS447
BLYS447

site_idSWS_FT_FI9
Number of Residues2
DetailsMOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:P0DMV8
ChainResidueDetails
AARG492
BARG492

site_idSWS_FT_FI10
Number of Residues2
DetailsMOD_RES: Phosphothreonine; alternate => ECO:0000250|UniProtKB:P11021
ChainResidueDetails
ATHR518
BTHR518

site_idSWS_FT_FI11
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P11021
ChainResidueDetails
ALYS352
BLYS352

site_idSWS_FT_FI12
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0000250|UniProtKB:P11021
ChainResidueDetails
ALYS353
BLYS353

223532

PDB entries from 2024-08-07

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