5O3N
Crystal structure of E. cloacae 3,4-dihydroxybenzoic acid decarboxylase (AroY) reconstituted with prFMN
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006744 | biological_process | ubiquinone biosynthetic process |
| A | 0008694 | molecular_function | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| A | 0033494 | biological_process | ferulate metabolic process |
| A | 0046281 | biological_process | cinnamic acid catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006744 | biological_process | ubiquinone biosynthetic process |
| B | 0008694 | molecular_function | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0033494 | biological_process | ferulate metabolic process |
| B | 0046281 | biological_process | cinnamic acid catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue MN A 501 |
| Chain | Residue |
| A | ASP166 |
| A | HIS189 |
| A | GLU233 |
| A | NA502 |
| A | 4LU508 |
| A | HOH621 |
| A | HOH665 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue NA A 502 |
| Chain | Residue |
| A | THR168 |
| A | GLU233 |
| A | MN501 |
| A | 4LU508 |
| A | HOH607 |
| A | ASP166 |
| A | VAL167 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | ALA471 |
| A | ARG472 |
| A | PHE473 |
| A | GLU474 |
| B | HIS285 |
| B | TYR293 |
| B | CYS294 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 504 |
| Chain | Residue |
| A | ASP402 |
| A | ASP404 |
| A | VAL465 |
| A | LYS470 |
| A | PHE473 |
| A | GLU474 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 505 |
| Chain | Residue |
| A | GLY187 |
| A | ARG188 |
| A | HIS189 |
| A | GLU223 |
| A | ALA224 |
| A | 4LU508 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 506 |
| Chain | Residue |
| A | HIS285 |
| A | TYR293 |
| A | CYS294 |
| B | ALA471 |
| B | ARG472 |
| B | PHE473 |
| B | GLU474 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue GOL A 507 |
| Chain | Residue |
| A | THR448 |
| A | THR448 |
| A | SER449 |
| A | HOH601 |
| B | VAL425 |
| site_id | AC8 |
| Number of Residues | 21 |
| Details | binding site for residue 4LU A 508 |
| Chain | Residue |
| A | CYS150 |
| A | ASP166 |
| A | THR168 |
| A | ILE169 |
| A | HIS170 |
| A | ARG171 |
| A | PHE183 |
| A | ALA185 |
| A | ARG188 |
| A | HIS189 |
| A | CYS221 |
| A | PHE222 |
| A | GLU223 |
| A | GLU233 |
| A | MN501 |
| A | NA502 |
| A | GOL505 |
| A | HOH607 |
| A | HOH665 |
| A | HOH678 |
| A | HOH743 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | binding site for residue MN B 501 |
| Chain | Residue |
| B | ASP166 |
| B | HIS189 |
| B | GLU233 |
| B | NA502 |
| B | 4LU504 |
| B | HOH604 |
| B | HOH681 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue NA B 502 |
| Chain | Residue |
| B | ASP166 |
| B | VAL167 |
| B | THR168 |
| B | GLU233 |
| B | MN501 |
| B | 4LU504 |
| B | HOH606 |
| site_id | AD2 |
| Number of Residues | 8 |
| Details | binding site for residue GOL B 503 |
| Chain | Residue |
| B | ASP402 |
| B | GLU403 |
| B | ASP404 |
| B | VAL465 |
| B | LYS470 |
| B | PHE473 |
| B | GLU474 |
| B | HOH638 |
| site_id | AD3 |
| Number of Residues | 21 |
| Details | binding site for residue 4LU B 504 |
| Chain | Residue |
| B | PHE222 |
| B | GLU223 |
| B | GLU233 |
| B | LEU320 |
| B | MN501 |
| B | NA502 |
| B | HOH606 |
| B | HOH607 |
| B | HOH681 |
| B | HOH700 |
| B | CYS150 |
| B | ASP166 |
| B | THR168 |
| B | ILE169 |
| B | HIS170 |
| B | ARG171 |
| B | PHE183 |
| B | ALA185 |
| B | ARG188 |
| B | HIS189 |
| B | CYS221 |
