5NKK
SMG8-SMG9 complex GDP bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
B | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
C | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
D | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
E | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
F | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue POP D 401 |
Chain | Residue |
D | PRO94 |
D | GLN95 |
D | GLY98 |
D | LYS99 |
D | SER100 |
D | THR101 |
site_id | AC2 |
Number of Residues | 2 |
Details | binding site for residue EDO E 501 |
Chain | Residue |
E | SER130 |
E | GLN192 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue GDP F 401 |
Chain | Residue |
F | GLN95 |
F | GLY98 |
F | LYS99 |
F | SER100 |
F | THR101 |
F | PRO122 |
F | VAL123 |
F | SER124 |
F | LYS241 |
F | GLU284 |
F | MG402 |
F | PRO94 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue MG F 402 |
Chain | Residue |
F | SER100 |
F | GDP401 |
F | HOH502 |