5NHM
Crystal structure of apo xylose isomerase from Piromyces E2
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0009045 | molecular_function | xylose isomerase activity |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0042732 | biological_process | D-xylose metabolic process |
| A | 0044577 | biological_process | xylose catabolic process to ethanol |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0009045 | molecular_function | xylose isomerase activity |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0042732 | biological_process | D-xylose metabolic process |
| B | 0044577 | biological_process | xylose catabolic process to ethanol |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0009045 | molecular_function | xylose isomerase activity |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0042732 | biological_process | D-xylose metabolic process |
| C | 0044577 | biological_process | xylose catabolic process to ethanol |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0009045 | molecular_function | xylose isomerase activity |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0042732 | biological_process | D-xylose metabolic process |
| D | 0044577 | biological_process | xylose catabolic process to ethanol |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 9 |
| Details | binding site for residue GOL A 501 |
| Chain | Residue |
| A | HIS102 |
| A | TRP140 |
| A | TRP189 |
| A | GLU233 |
| A | ASP297 |
| A | ASP340 |
| A | HOH601 |
| A | HOH733 |
| A | HOH847 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 502 |
| Chain | Residue |
| A | GLU249 |
| A | LYS256 |
| A | HOH608 |
| A | HOH609 |
| A | HOH628 |
| B | ALA257 |
| B | HOH815 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 A 503 |
| Chain | Residue |
| A | SER112 |
| A | ILE113 |
| A | HOH684 |
| A | HOH709 |
| A | HOH734 |
| A | HOH928 |
| B | GLY417 |
| B | GLU418 |
| B | HOH884 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue ACY A 504 |
| Chain | Residue |
| A | HIS26 |
| A | ASP362 |
| A | ARG366 |
| A | HOH614 |
| A | HOH771 |
| D | ALA434 |
| D | MET435 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | binding site for residue GOL B 501 |
| Chain | Residue |
| B | HIS102 |
| B | TRP140 |
| B | TRP189 |
| B | GLU233 |
| B | ASP297 |
| B | ASP340 |
| B | HOH601 |
| B | HOH721 |
| B | HOH960 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL B 502 |
| Chain | Residue |
| A | ALA257 |
| A | HOH777 |
| B | GLU249 |
| B | LYS256 |
| B | HOH631 |
| B | HOH640 |
| B | HOH769 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 B 503 |
| Chain | Residue |
| A | GLY417 |
| A | GLU418 |
| A | HOH651 |
| A | HOH760 |
| B | SER112 |
| B | ILE113 |
| B | GLU114 |
| B | HOH679 |
| B | HOH729 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | binding site for residue GOL C 501 |
| Chain | Residue |
| C | HIS102 |
| C | TRP189 |
| C | GLU233 |
| C | ASP297 |
| C | ASP340 |
| C | HOH601 |
| C | HOH727 |
| C | HOH769 |
| site_id | AC9 |
| Number of Residues | 8 |
| Details | binding site for residue SO4 C 502 |
| Chain | Residue |
| C | SER112 |
| C | ILE113 |
| C | HOH706 |
| C | HOH719 |
| D | GLY417 |
| D | GLU418 |
| D | HOH666 |
| D | HOH806 |
| site_id | AD1 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 C 503 |
| Chain | Residue |
| C | GLY417 |
| C | GLU418 |
| C | HOH639 |
| C | HOH787 |
| C | HOH808 |
| C | HOH891 |
| D | SER112 |
| D | ILE113 |
| D | HOH754 |
| site_id | AD2 |
| Number of Residues | 8 |
| Details | binding site for residue GOL D 501 |
| Chain | Residue |
| D | HIS102 |
| D | TRP140 |
| D | TRP189 |
| D | GLU233 |
| D | ASP297 |
| D | ASP340 |
| D | HOH601 |
| D | HOH802 |
| site_id | AD3 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 502 |
| Chain | Residue |
| C | ALA257 |
| D | GLU249 |
| D | LYS256 |
| D | HOH613 |
| D | HOH661 |
| D | HOH692 |
| D | HOH918 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue ACY D 503 |
| Chain | Residue |
| D | ASP362 |
| D | ARG366 |
| A | ALA434 |
| D | HIS26 |
