5NHB
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Fe2+ ions
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0009045 | molecular_function | xylose isomerase activity |
A | 0016853 | molecular_function | isomerase activity |
A | 0042732 | biological_process | D-xylose metabolic process |
A | 0044577 | biological_process | D-xylose catabolic process to ethanol |
A | 0046872 | molecular_function | metal ion binding |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0009045 | molecular_function | xylose isomerase activity |
B | 0016853 | molecular_function | isomerase activity |
B | 0042732 | biological_process | D-xylose metabolic process |
B | 0044577 | biological_process | D-xylose catabolic process to ethanol |
B | 0046872 | molecular_function | metal ion binding |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0009045 | molecular_function | xylose isomerase activity |
C | 0016853 | molecular_function | isomerase activity |
C | 0042732 | biological_process | D-xylose metabolic process |
C | 0044577 | biological_process | D-xylose catabolic process to ethanol |
C | 0046872 | molecular_function | metal ion binding |
D | 0005975 | biological_process | carbohydrate metabolic process |
D | 0009045 | molecular_function | xylose isomerase activity |
D | 0016853 | molecular_function | isomerase activity |
D | 0042732 | biological_process | D-xylose metabolic process |
D | 0044577 | biological_process | D-xylose catabolic process to ethanol |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue FE2 A 501 |
Chain | Residue |
A | GLU233 |
A | GLU269 |
A | ASP297 |
A | ASP340 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue FE2 A 502 |
Chain | Residue |
A | GLU269 |
A | HIS272 |
A | ASP308 |
A | ASP340 |
A | HOH647 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 503 |
Chain | Residue |
A | SER112 |
A | ILE113 |
A | HOH622 |
B | GLY417 |
B | GLU418 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 504 |
Chain | Residue |
A | GLY417 |
A | GLU418 |
B | ASN111 |
B | SER112 |
B | ILE113 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue FE2 B 501 |
Chain | Residue |
B | GLU233 |
B | GLU269 |
B | ASP297 |
B | ASP340 |
B | HOH671 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue FE2 B 502 |
Chain | Residue |
B | GLU269 |
B | HIS272 |
B | ASP308 |
B | ASP340 |
B | HOH623 |
B | HOH632 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue FE2 C 501 |
Chain | Residue |
C | GLU233 |
C | GLU269 |
C | ASP297 |
C | ASP340 |
C | HOH646 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue FE2 C 502 |
Chain | Residue |
C | GLU269 |
C | HIS272 |
C | ASP308 |
C | ASP340 |
C | HOH632 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 503 |
Chain | Residue |
C | ILE113 |
D | GLY417 |
D | GLU418 |
site_id | AD1 |
Number of Residues | 5 |
Details | binding site for residue FE2 D 501 |
Chain | Residue |
D | GLU233 |
D | GLU269 |
D | ASP297 |
D | ASP340 |
D | HOH624 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue FE2 D 502 |
Chain | Residue |
D | GLU269 |
D | HIS272 |
D | ASP308 |
D | HOH676 |