5N0L

The structure of the cofactor binding GAF domain of the nutrient sensor CodY from Clostridium difficile

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003677	molecular_function	DNA binding
A	0003700	molecular_function	DNA-binding transcription factor activity
A	0005525	molecular_function	GTP binding
A	0045892	biological_process	negative regulation of DNA-templated transcription
B	0003677	molecular_function	DNA binding
B	0003700	molecular_function	DNA-binding transcription factor activity
B	0005525	molecular_function	GTP binding
B	0045892	biological_process	negative regulation of DNA-templated transcription
C	0003677	molecular_function	DNA binding
C	0003700	molecular_function	DNA-binding transcription factor activity
C	0005525	molecular_function	GTP binding
C	0045892	biological_process	negative regulation of DNA-templated transcription
D	0003677	molecular_function	DNA binding
D	0003700	molecular_function	DNA-binding transcription factor activity
D	0005525	molecular_function	GTP binding
D	0045892	biological_process	negative regulation of DNA-templated transcription
E	0003677	molecular_function	DNA binding
E	0003700	molecular_function	DNA-binding transcription factor activity
E	0005525	molecular_function	GTP binding
E	0045892	biological_process	negative regulation of DNA-templated transcription
F	0003677	molecular_function	DNA binding
F	0003700	molecular_function	DNA-binding transcription factor activity
F	0005525	molecular_function	GTP binding
F	0045892	biological_process	negative regulation of DNA-templated transcription

Functional Information from PDB Data

site_id	AC1
Number of Residues	8
Details	binding site for residue ILE A 201

Chain	Residue
A	ASN40
A	TYR42
A	ASP60
A	SER62
A	GLU104
A	ARG107
A	LYS110
A	SER130

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site_id	AC2
Number of Residues	8
Details	binding site for residue ILE B 201

Chain	Residue
B	TYR42
B	ASP60
B	SER62
B	GLU104
B	ARG107
B	LYS110
B	SER130
B	ASN40

---

site_id	AC3
Number of Residues	8
Details	binding site for residue ILE C 201

Chain	Residue
C	ASN40
C	TYR42
C	ASP60
C	SER62
C	GLU104
C	ARG107
C	LYS110
C	SER130

---

site_id	AC4
Number of Residues	8
Details	binding site for residue ILE D 201

Chain	Residue
D	ASN40
D	TYR42
D	ASP60
D	SER62
D	GLU104
D	ARG107
D	LYS110
D	SER130

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site_id	AC5
Number of Residues	8
Details	binding site for residue ILE E 201

Chain	Residue
E	ASN40
E	TYR42
E	ASP60
E	SER62
E	GLU104
E	ARG107
E	LYS110
E	SER130

---

site_id	AC6
Number of Residues	8
Details	binding site for residue ILE F 201

Chain	Residue
F	ASN40
F	TYR42
F	ASP60
F	SER62
F	GLU104
F	ARG107
F	LYS110
F	SER130

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