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5MUV

Atomic structure fitted into a localized reconstruction of bacteriophage phi6 packaging hexamer P4

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0016787molecular_functionhydrolase activity
A0017111molecular_functionribonucleoside triphosphate phosphatase activity
A0019028cellular_componentviral capsid
A0019072biological_processviral genome packaging
A0046729cellular_componentviral procapsid
B0005524molecular_functionATP binding
B0016787molecular_functionhydrolase activity
B0017111molecular_functionribonucleoside triphosphate phosphatase activity
B0019028cellular_componentviral capsid
B0019072biological_processviral genome packaging
B0046729cellular_componentviral procapsid
I0005524molecular_functionATP binding
I0016787molecular_functionhydrolase activity
I0017111molecular_functionribonucleoside triphosphate phosphatase activity
I0019028cellular_componentviral capsid
I0019072biological_processviral genome packaging
I0046729cellular_componentviral procapsid
J0005524molecular_functionATP binding
J0016787molecular_functionhydrolase activity
J0017111molecular_functionribonucleoside triphosphate phosphatase activity
J0019028cellular_componentviral capsid
J0019072biological_processviral genome packaging
J0046729cellular_componentviral procapsid
K0005524molecular_functionATP binding
K0016787molecular_functionhydrolase activity
K0017111molecular_functionribonucleoside triphosphate phosphatase activity
K0019028cellular_componentviral capsid
K0019072biological_processviral genome packaging
K0046729cellular_componentviral procapsid
L0005524molecular_functionATP binding
L0016787molecular_functionhydrolase activity
L0017111molecular_functionribonucleoside triphosphate phosphatase activity
L0019028cellular_componentviral capsid
L0019072biological_processviral genome packaging
L0046729cellular_componentviral procapsid
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue CA A 401
ChainResidue
ASER133
AGLU150
AADP402

site_idAC2
Number of Residues12
Detailsbinding site for residue ADP A 402
ChainResidue
AILE134
AGLY260
ACA401
LARG264
LARG273
LPHE275
AALA127
AGLY129
ASER130
AGLY131
ALYS132
ASER133

site_idAC3
Number of Residues3
Detailsbinding site for residue CA B 401
ChainResidue
BSER133
BGLU150
BADP402

site_idAC4
Number of Residues12
Detailsbinding site for residue ADP B 402
ChainResidue
AARG264
AARG273
APHE275
BALA127
BGLY129
BSER130
BGLY131
BLYS132
BSER133
BILE134
BGLY260
BCA401

site_idAC5
Number of Residues4
Detailsbinding site for residue CA I 402
ChainResidue
ISER133
IGLU150
IGLU153
IADP401

site_idAC6
Number of Residues9
Detailsbinding site for residue ADP I 401
ChainResidue
BARG273
BPHE275
IGLY129
ISER130
IGLY131
ILYS132
ISER133
IILE134
ICA402

site_idAC7
Number of Residues3
Detailsbinding site for residue CA J 401
ChainResidue
JSER133
JGLU150
JADP402

site_idAC8
Number of Residues11
Detailsbinding site for residue ADP J 402
ChainResidue
IARG273
IPHE275
JALA127
JGLY129
JSER130
JGLY131
JLYS132
JSER133
JILE134
JGLY260
JCA401

site_idAC9
Number of Residues4
Detailsbinding site for residue CA K 401
ChainResidue
KSER133
KGLU150
KGLU153
KADP402

site_idAD1
Number of Residues9
Detailsbinding site for residue ADP K 402
ChainResidue
JPHE275
KALA127
KGLY129
KSER130
KGLY131
KLYS132
KSER133
KILE134
KCA401

site_idAD2
Number of Residues4
Detailsbinding site for residue CA L 401
ChainResidue
LSER133
LGLU150
LGLU153
LADP402

site_idAD3
Number of Residues10
Detailsbinding site for residue ADP L 402
ChainResidue
KARG264
KARG273
LGLY129
LSER130
LGLY131
LLYS132
LSER133
LILE134
LGLY260
LCA401

site_idAD4
Number of Residues14
Detailsbinding site for Ligand residues GLN J 7 through ILE B 10 bound to THR B 6
ChainResidue
BTHR6
BALA8
BHIS9
BASP11
BARG12
BVAL13
BMET49
JTHR6
JALA8
JHIS9
JASP11
JARG12
JVAL13
JMET49

site_idAD5
Number of Residues5
Detailsbinding site for Ligand THR J 6 bound to THR B 6
ChainResidue
JGLN7
JALA8
JHIS9
JILE10
JVAL5

site_idAD6
Number of Residues14
Detailsbinding site for Ligand residues GLN A 7 through ILE K 10 bound to THR K 6
ChainResidue
ATHR6
AALA8
AHIS9
AASP11
AARG12
AVAL13
AMET49
KTHR6
KALA8
KHIS9
KASP11
KARG12
KVAL13
KMET49

site_idAD7
Number of Residues19
Detailsbinding site for Ligand residues ALA A 8 through ASP A 11 bound to THR K 6
ChainResidue
AVAL4
ATHR6
AGLN7
AHIS9
AILE10
AARG12
AVAL13
AILE15
AALA52
AGLY57
KILE3
KVAL4
KTHR6
KGLN7
KHIS9
KILE10
KARG12
KVAL13
KGLY57

site_idAD8
Number of Residues5
Detailsbinding site for Ligand GLN A 7 bound to THR K 6
ChainResidue
ATHR6
AALA8
AHIS9
AILE10
AASP11

site_idAD9
Number of Residues5
Detailsbinding site for Ligand GLN A 7 bound to THR K 6
ChainResidue
ATHR6
AALA8
AHIS9
AILE10
AASP11

site_idAE1
Number of Residues16
Detailsbinding site for Di-peptide VAL B 5 and ALA J 8
ChainResidue
BVAL4
BTHR6
BGLN7
BHIS9
BILE10
BASP11
BARG12
BGLY57
JVAL4
JTHR6
JGLN7
JHIS9
JILE10
JASP11
JARG12
JGLY57

site_idAE2
Number of Residues16
Detailsbinding site for Di-peptide VAL B 5 and ALA J 8
ChainResidue
BVAL4
BTHR6
BGLN7
BHIS9
BILE10
BASP11
BARG12
BGLY57
JVAL4
JTHR6
JGLN7
JHIS9
JILE10
JASP11
JARG12
JGLY57

site_idAE3
Number of Residues16
Detailsbinding site for Di-peptide VAL B 5 and ALA J 8
ChainResidue
BVAL4
BTHR6
BGLN7
BHIS9
BILE10
BASP11
BARG12
BGLY57
JVAL4
JTHR6
JGLN7
JHIS9
JILE10
JASP11
JARG12
JGLY57

site_idAE4
Number of Residues19
Detailsbinding site for Di-peptide VAL B 5 and ASP J 11
ChainResidue
BVAL4
BTHR6
BGLN7
BALA8
BHIS9
BILE10
BARG12
BVAL13
BILE15
BGLY57
JVAL4
JTHR6
JGLN7
JALA8
JHIS9
JILE10
JARG12
JVAL13
JGLY57

site_idAE5
Number of Residues10
Detailsbinding site for Di-peptide GLN B 7 and GLN L 7
ChainResidue
BTHR6
BALA8
BHIS9
BILE10
BASP11
LTHR6
LALA8
LHIS9
LILE10
LASP11

site_idAE6
Number of Residues28
Detailsbinding site for Di-peptide ASP B 18 and SER L 53
ChainResidue
BGLY14
BILE15
BALA16
BALA17
BLEU19
BLEU20
BASP21
BALA22
BMET49
BGLU50
BLEU51
BALA52
BLYS54
BGLN55
LGLY14
LILE15
LALA16
LALA17
LLEU19
LLEU20
LASP21
LALA22
LMET49
LGLU50
LLEU51
LALA52
LLYS54
LGLN55

site_idAE7
Number of Residues28
Detailsbinding site for Di-peptide ASP B 18 and SER L 53
ChainResidue
BGLY14
BILE15
BALA16
BALA17
BLEU19
BLEU20
BASP21
BALA22
BMET49
BGLU50
BLEU51
BALA52
BLYS54
BGLN55
LGLY14
LILE15
LALA16
LALA17
LLEU19
LLEU20
LASP21
LALA22
LMET49
LGLU50
LLEU51
LALA52
LLYS54
LGLN55

site_idAE8
Number of Residues28
Detailsbinding site for Di-peptide ASP B 18 and SER L 53
ChainResidue
BGLY14
BILE15
BALA16
BALA17
BLEU19
BLEU20
BASP21
BALA22
BMET49
BGLU50
BLEU51
BALA52
BLYS54
BGLN55
LGLY14
LILE15
LALA16
LALA17
LLEU19
LLEU20
LASP21
LALA22
LMET49
LGLU50
LLEU51
LALA52
LLYS54
LGLN55

site_idAE9
Number of Residues13
Detailsbinding site for Di-peptide GLN I 7 and ASP K 11
ChainResidue
ITHR6
IALA8
IHIS9
IILE10
IARG12
IVAL13
IILE15
KTHR6
KALA8
KHIS9
KILE10
KARG12
KVAL13

site_idAF1
Number of Residues13
Detailsbinding site for Di-peptide GLN I 7 and ASP K 11
ChainResidue
ITHR6
IALA8
IHIS9
IILE10
IARG12
IVAL13
IILE15
KTHR6
KALA8
KHIS9
KILE10
KARG12
KVAL13

site_idAF2
Number of Residues13
Detailsbinding site for Di-peptide GLN I 7 and ASP K 11
ChainResidue
ITHR6
IALA8
IHIS9
IILE10
IARG12
IVAL13
IILE15
KTHR6
KALA8
KHIS9
KILE10
KARG12
KVAL13

site_idAF3
Number of Residues13
Detailsbinding site for Di-peptide GLN I 7 and ASP K 11
ChainResidue
ITHR6
IALA8
IHIS9
IILE10
IARG12
IVAL13
IILE15
KTHR6
KALA8
KHIS9
KILE10
KARG12
KVAL13

site_idAF4
Number of Residues29
Detailsbinding site for Di-peptide ASP J 11 and ALA B 52
ChainResidue
BGLN7
BALA8
BHIS9
BILE10
BARG12
BVAL13
BILE15
BVAL48
BMET49
BGLU50
BLEU51
BSER53
BLYS54
BGLN55
BGLY57
JGLN7
JALA8
JHIS9
JILE10
JARG12
JVAL13
JVAL48
JMET49
JGLU50
JLEU51
JSER53
JLYS54
JGLN55
JGLY57

site_idAF5
Number of Residues38
Detailsbinding site for Di-peptide ARG J 12 and GLY B 57
ChainResidue
BILE3
BVAL4
BVAL5
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BALA52
BGLN55
BGLY56
BSER58
BLEU59
BALA179
BLEU180
BASP224
JILE3
JVAL4
JVAL5
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JALA52
JGLN55
JGLY56
JSER58
JLEU59
JALA179
JLEU180
JASP224

site_idAF6
Number of Residues30
Detailsbinding site for Di-peptide ARG J 12 and SER B 58
ChainResidue
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BGLN55
BGLY56
BGLY57
BLEU59
BALA179
BLEU180
BASP224
JPRO2
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JGLY56
JGLY57
JLEU59
JALA179
JLEU180
JASP224

site_idAF7
Number of Residues30
Detailsbinding site for Di-peptide ARG J 12 and SER B 58
ChainResidue
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BGLN55
BGLY56
BGLY57
BLEU59
BALA179
BLEU180
BASP224
JPRO2
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JGLY56
JGLY57
JLEU59
JALA179
JLEU180
JASP224

site_idAF8
Number of Residues35
Detailsbinding site for Di-peptide ARG J 12 and GLN B 55
ChainResidue
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
BALA179
BLEU180
BASP224
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57
JALA179
JLEU180
JASP224

site_idAF9
Number of Residues30
Detailsbinding site for Di-peptide ARG J 12 and SER B 58
ChainResidue
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BGLN55
BGLY56
BGLY57
BLEU59
BALA179
BLEU180
BASP224
JPRO2
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JGLY56
JGLY57
JLEU59
JALA179
JLEU180
JASP224

site_idAG1
Number of Residues28
Detailsbinding site for Di-peptide ARG J 12 and GLY B 56
ChainResidue
BALA8
BHIS9
BILE10
BASP11
BVAL13
BGLY14
BILE15
BALA16
BGLN55
BGLY57
BSER58
BALA179
BLEU180
BASP224
JALA8
JHIS9
JILE10
JASP11
JVAL13
JGLY14
JILE15
JALA16
JGLN55
JGLY57
JSER58
JALA179
JLEU180
JASP224

site_idAG2
Number of Residues29
Detailsbinding site for Di-peptide VAL J 13 and GLN B 55
ChainResidue
BHIS9
BILE10
BASP11
BARG12
BGLY14
BILE15
BALA16
BALA17
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
JHIS9
JILE10
JASP11
JARG12
JGLY14
JILE15
JALA16
JALA17
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57

site_idAG3
Number of Residues29
Detailsbinding site for Di-peptide VAL J 13 and GLN B 55
ChainResidue
BHIS9
BILE10
BASP11
BARG12
BGLY14
BILE15
BALA16
BALA17
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
JHIS9
JILE10
JASP11
JARG12
JGLY14
JILE15
JALA16
JALA17
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57

site_idAG4
Number of Residues22
Detailsbinding site for Di-peptide GLY J 14 and LYS B 54
ChainResidue
BARG12
BVAL13
BILE15
BALA16
BALA17
BASP18
BGLU50
BLEU51
BALA52
BSER53
BGLN55
JARG12
JVAL13
JILE15
JALA16
JALA17
JASP18
JGLU50
JLEU51
JALA52
JSER53
JGLN55

site_idAG5
Number of Residues22
Detailsbinding site for Di-peptide GLY J 14 and LYS B 54
ChainResidue
BARG12
BVAL13
BILE15
BALA16
BALA17
BASP18
BGLU50
BLEU51
BALA52
BSER53
BGLN55
JARG12
JVAL13
JILE15
JALA16
JALA17
JASP18
JGLU50
JLEU51
JALA52
JSER53
JGLN55

site_idAG6
Number of Residues28
Detailsbinding site for Di-peptide ILE J 15 and GLN B 55
ChainResidue
BASP11
BARG12
BVAL13
BGLY14
BALA16
BALA17
BASP18
BLEU19
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
JARG12
JVAL13
JGLY14
JALA16
JALA17
JASP18
JLEU19
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57

site_idAG7
Number of Residues28
Detailsbinding site for Di-peptide ILE J 15 and GLN B 55
ChainResidue
BASP11
BARG12
BVAL13
BGLY14
BALA16
BALA17
BASP18
BLEU19
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
JARG12
JVAL13
JGLY14
JALA16
JALA17
JASP18
JLEU19
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57

site_idAG8
Number of Residues28
Detailsbinding site for Di-peptide ILE J 15 and GLN B 55
ChainResidue
BASP11
BARG12
BVAL13
BGLY14
BALA16
BALA17
BASP18
BLEU19
BLEU51
BALA52
BSER53
BLYS54
BGLY56
BGLY57
BSER58
JARG12
JVAL13
JGLY14
JALA16
JALA17
JASP18
JLEU19
JLEU51
JALA52
JSER53
JLYS54
JGLY56
JGLY57

site_idAG9
Number of Residues26
Detailsbinding site for Di-peptide ILE J 15 and LEU B 59
ChainResidue
BILE3
BASP11
BARG12
BVAL13
BGLY14
BALA16
BALA17
BASP18
BLEU19
BLEU51
BGLY57
BSER58
BALA60
BILE64
JILE3
JARG12
JVAL13
JGLY14
JALA16
JALA17
JASP18
JLEU19
JGLY57
JSER58
JALA60
JILE64

site_idAH1
Number of Residues28
Detailsbinding site for Di-peptide ASP K 18 and SER I 53
ChainResidue
IGLY14
IILE15
IALA16
IALA17
ILEU19
ILEU20
IASP21
IALA22
IMET49
IGLU50
ILEU51
IALA52
ILYS54
IGLN55
KGLY14
KILE15
KALA16
KALA17
KLEU19
KLEU20
KASP21
KALA22
KMET49
KGLU50
KLEU51
KALA52
KLYS54
KGLN55

site_idAH2
Number of Residues13
Detailsbinding site for Di-peptide GLN L 7 and ASP B 11
ChainResidue
BTHR6
BALA8
BHIS9
BILE10
BARG12
BVAL13
BILE15
LTHR6
LALA8
LHIS9
LILE10
LARG12
LVAL13

site_idAH3
Number of Residues13
Detailsbinding site for Di-peptide GLN L 7 and ASP B 11
ChainResidue
BTHR6
BALA8
BHIS9
BILE10
BARG12
BVAL13
BILE15
LTHR6
LALA8
LHIS9
LILE10
LARG12
LVAL13

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLY126
BGLY126
IGLY126
JGLY126
KGLY126
LGLY126

222624

PDB entries from 2024-07-17

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