Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5MOG

Oryza sativa phytoene desaturase inhibited by norflurazon

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0016117	biological_process	carotenoid biosynthetic process
A	0016166	molecular_function	phytoene dehydrogenase activity
A	0016491	molecular_function	oxidoreductase activity
B	0016117	biological_process	carotenoid biosynthetic process
B	0016166	molecular_function	phytoene dehydrogenase activity
B	0016491	molecular_function	oxidoreductase activity
C	0016117	biological_process	carotenoid biosynthetic process
C	0016166	molecular_function	phytoene dehydrogenase activity
C	0016491	molecular_function	oxidoreductase activity
D	0016117	biological_process	carotenoid biosynthetic process
D	0016166	molecular_function	phytoene dehydrogenase activity
D	0016491	molecular_function	oxidoreductase activity
E	0016117	biological_process	carotenoid biosynthetic process
E	0016166	molecular_function	phytoene dehydrogenase activity
E	0016491	molecular_function	oxidoreductase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	32
Details	binding site for residue FAD A 600

Chain	Residue
A	GLY111
A	GLY141
A	LYS142
A	ILE143
A	GLY157
A	LEU158
A	HIS159
A	ILE160
A	TYR165
A	PHE283
A	ARG341
A	GLY113
A	ILE342
A	ALA372
A	THR373
A	ILE377
A	GLY530
A	ASP531
A	ALA539
A	SER540
A	MET541
A	ALA544
A	LEU114
A	NRF601
A	HOH703
A	HOH728
A	ALA115
A	LEU133
A	GLU134
A	ALA135
A	ARG136
A	GLY140

site_id	AC2
Number of Residues	12
Details	binding site for residue NRF A 601

Chain	Residue
A	PHE162
A	TYR165
A	MET277
A	ALA280
A	LEU281
A	PHE283
A	ARG300
A	LEU421
A	PHE423
A	ALA539
A	SER540
A	FAD600

site_id	AC3
Number of Residues	5
Details	binding site for residue EPE A 602

Chain	Residue
A	ARG136
A	ASP137
A	VAL138
A	TRP146
B	ASP137

site_id	AC4
Number of Residues	3
Details	binding site for residue EPE A 603

Chain	Residue
A	ASN222
A	TRP227
A	LYS230

site_id	AC5
Number of Residues	1
Details	binding site for residue IMD A 604

Chain	Residue
A	HIS306

site_id	AC6
Number of Residues	35
Details	binding site for residue FAD B 600

Chain	Residue
B	GLY111
B	GLY113
B	LEU114
B	ALA115
B	LEU133
B	GLU134
B	ALA135
B	ARG136
B	GLY140
B	GLY141
B	LYS142
B	ILE143
B	GLY157
B	LEU158
B	HIS159
B	ILE160
B	TYR165
B	PHE283
B	ARG341
B	ILE342
B	ALA372
B	THR373
B	ILE377
B	GLY530
B	ASP531
B	ALA539
B	SER540
B	MET541
B	ALA544
B	NRF601
B	HOH701
B	HOH727
B	HOH734
B	HOH737
B	HOH767

site_id	AC7
Number of Residues	12
Details	binding site for residue NRF B 601

Chain	Residue
B	FAD600
B	PHE162
B	TYR165
B	MET277
B	ALA280
B	LEU281
B	PHE283
B	ARG300
B	LEU421
B	PHE423
B	ALA539
B	SER540

site_id	AC8
Number of Residues	6
Details	binding site for residue EPE B 602

Chain	Residue
A	ASP137
A	ASN339
B	ARG136
B	ASP137
B	VAL138
B	TRP146

site_id	AC9
Number of Residues	1
Details	binding site for residue EPE B 603

Chain	Residue
B	TRP227

site_id	AD1
Number of Residues	3
Details	binding site for residue TRS B 604

Chain	Residue
B	MET323
B	ARG330
B	LEU338

site_id	AD2
Number of Residues	2
Details	binding site for residue IMD B 606

Chain	Residue
B	GLN169
B	HIS306

site_id	AD3
Number of Residues	31
Details	binding site for residue FAD C 600

Chain	Residue
C	GLY111
C	GLY113
C	LEU114
C	ALA115
C	LEU133
C	GLU134
C	ALA135
C	ARG136
C	GLY140
C	GLY141
C	LYS142
C	ILE143
C	GLY157
C	LEU158
C	HIS159
C	ILE160
C	TYR165
C	PHE283
C	ARG341
C	ILE342
C	ALA372
C	THR373
C	ILE377
C	GLY530
C	ASP531
C	ALA539
C	SER540
C	MET541
C	ALA544
C	NRF601
C	HOH728

site_id	AD4
Number of Residues	12
Details	binding site for residue NRF C 601

Chain	Residue
C	PHE162
C	TYR165
C	MET277
C	ALA280
C	LEU281
C	PHE283
C	ARG300
C	LEU421
C	PHE423
C	ALA539
C	SER540
C	FAD600

site_id	AD5
Number of Residues	34
Details	binding site for residue FAD D 600

Chain	Residue
D	GLY111
D	GLY113
D	LEU114
D	ALA115
D	LEU133
D	GLU134
D	ALA135
D	ARG136
D	GLY140
D	GLY141
D	LYS142
D	ILE143
D	GLY157
D	LEU158
D	HIS159
D	ILE160
D	TYR165
D	PHE283
D	ARG341
D	ILE342
D	ALA372
D	THR373
D	ILE377
D	GLY530
D	ASP531
D	ALA539
D	SER540
D	MET541
D	ALA544
D	NRF601
D	HOH701
D	HOH714
D	HOH731
D	HOH732

site_id	AD6
Number of Residues	12
Details	binding site for residue NRF D 601

Chain	Residue
D	PHE162
D	TYR165
D	MET277
D	ALA280
D	LEU281
D	PHE283
D	ARG300
D	LEU421
D	PHE423
D	ALA539
D	SER540
D	FAD600

site_id	AD7
Number of Residues	2
Details	binding site for residue TRS D 602

Chain	Residue
D	MET323
D	ARG330

site_id	AD8
Number of Residues	6
Details	binding site for residue IMD D 603

Chain	Residue
D	ASP152
D	TRP153
D	TRP409
D	TYR442
D	MET449
D	HOH739

site_id	AD9
Number of Residues	1
Details	binding site for residue IMD D 605

Chain	Residue
D	GLN169

site_id	AE1
Number of Residues	31
Details	binding site for residue FAD E 600

Chain	Residue
E	GLY111
E	GLY113
E	LEU114
E	ALA115
E	LEU133
E	GLU134
E	ALA135
E	ARG136
E	GLY140
E	GLY141
E	LYS142
E	ILE143
E	GLY157
E	LEU158
E	HIS159
E	ILE160
E	TYR165
E	PHE283
E	ARG341
E	ILE342
E	ALA372
E	THR373
E	ILE377
E	GLY530
E	ASP531
E	ALA539
E	SER540
E	MET541
E	ALA544
E	NRF601
E	HOH701

site_id	AE2
Number of Residues	12
Details	binding site for residue NRF E 601

Chain	Residue
E	PHE162
E	TYR165
E	MET277
E	ALA280
E	LEU281
E	PHE283
E	ARG300
E	LEU421
E	PHE423
E	ALA539
E	SER540
E	FAD600

site_id	AE3
Number of Residues	1
Details	binding site for residue EPE E 602

Chain	Residue
E	TRP227

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	50
Details	BINDING: BINDING => ECO:0000269\|PubMed:28669634, ECO:0007744\|PDB:5MOG

Chain	Residue	Details
A	ALA115
A	MET541
B	ALA115
B	GLU134
B	LYS142
B	HIS159
B	TYR165
B	ARG300
B	ILE342
B	ASP531
B	ALA539
A	GLU134
B	MET541
C	ALA115
C	GLU134
C	LYS142
C	HIS159
C	TYR165
C	ARG300
C	ILE342
C	ASP531
C	ALA539
A	LYS142
C	MET541
D	ALA115
D	GLU134
D	LYS142
D	HIS159
D	TYR165
D	ARG300
D	ILE342
D	ASP531
D	ALA539
A	HIS159
D	MET541
E	ALA115
E	GLU134
E	LYS142
E	HIS159
E	TYR165
E	ARG300
E	ILE342
E	ASP531
E	ALA539
A	TYR165
E	MET541
A	ARG300
A	ILE342
A	ASP531
A	ALA539

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)