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5MKV

Crystal Structure of Human Dihydropyrimidinease-like 2 (DPYSL2A)/Collapsin Response Mediator Protein (CRMP2) residues 13-516

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0016787molecular_functionhydrolase activity
A0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
B0005737cellular_componentcytoplasm
B0016787molecular_functionhydrolase activity
B0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
C0005737cellular_componentcytoplasm
C0016787molecular_functionhydrolase activity
C0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
D0005737cellular_componentcytoplasm
D0016787molecular_functionhydrolase activity
D0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 601
ChainResidue
ALYS254
AGLU353
AEDO606
AHOH800

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 602
ChainResidue
AHOH728
AASN426
ALEU454
AGLY457
AEDO603
AHOH713

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 603
ChainResidue
AGLU359
ATHR424
AEDO602
AHOH713

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 604
ChainResidue
AVAL109
APRO110
AGLU111
ATHR114
AALA119

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 605
ChainResidue
AARG268
ATHR272
AARG481
BSER322
BCYS323

site_idAC6
Number of Residues10
Detailsbinding site for residue EDO A 606
ChainResidue
AILE279
ATHR303
ASER331
AALA332
ACYS334
AGLY354
ATHR355
AEDO601
AHOH710
AHOH799

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO A 607
ChainResidue
AARG268
ATYR275
AGLN327
APHE477
AARG481
AHOH775
AHOH822

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 608
ChainResidue
ATRP295
ALYS345
CLYS423
CARG496
CGLY497
CLEU498
CTYR499

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 609
ChainResidue
ALYS345
CTYR431
CTYR499

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO A 610
ChainResidue
AASP27
AASP376
AGLN379
AHOH716
BPHE477

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 611
ChainResidue
AASP476
ALYS480
BLYS23

site_idAD3
Number of Residues2
Detailsbinding site for residue EDO B 601
ChainResidue
BHOH701
BHOH703

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO B 602
ChainResidue
ASER30
AGLU377
BASP476
BLYS480
BHOH702

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO B 603
ChainResidue
BARG268
BVAL274
BTYR275
BGLN327
BARG481

site_idAD6
Number of Residues9
Detailsbinding site for residue EDO B 604
ChainResidue
BALA95
BHIS333
BASN356
BGLU359
BGLU360
BHIS425
BSER427
BASN432
BHOH724

site_idAD7
Number of Residues4
Detailsbinding site for residue EDO C 601
ChainResidue
CARG268
CTHR272
CARG481
DHOH759

site_idAD8
Number of Residues1
Detailsbinding site for residue EDO D 601
ChainResidue
DHOH803

site_idAD9
Number of Residues2
Detailsbinding site for residue EDO D 602
ChainResidue
DILE401
DALA402

site_idAE1
Number of Residues5
Detailsbinding site for residue EDO D 603
ChainResidue
DASP27
DASN378
DGLN379
DALA382
DHOH819

site_idAE2
Number of Residues4
Detailsbinding site for residue EDO D 604
ChainResidue
DMET64
DTRP366
DGLU377
DPRO414

site_idAE3
Number of Residues3
Detailsbinding site for residue EDO D 605
ChainResidue
DASN426
DLEU454
DGLY457

site_idAE4
Number of Residues8
Detailsbinding site for residue EDO D 606
ChainResidue
DHIS333
DASN356
DGLU359
DGLU360
DHIS425
DASN432
DHOH703
DHOH707

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsModified residue: {"description":"Phosphotyrosine; by FYN","evidences":[{"source":"PubMed","id":"19652227","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"O08553","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P47942","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues7
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"O08553","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues5
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"O08553","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"S-nitrosocysteine","evidences":[{"source":"UniProtKB","id":"P47942","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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