5MDN

Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003676	molecular_function	nucleic acid binding
A	0003677	molecular_function	DNA binding
A	0003887	molecular_function	DNA-directed DNA polymerase activity
A	0006260	biological_process	DNA replication
A	0046872	molecular_function	metal ion binding
A	0071897	biological_process	DNA biosynthetic process
B	0000166	molecular_function	nucleotide binding
B	0003676	molecular_function	nucleic acid binding
B	0003677	molecular_function	DNA binding
B	0003887	molecular_function	DNA-directed DNA polymerase activity
B	0006260	biological_process	DNA replication
B	0046872	molecular_function	metal ion binding
B	0071897	biological_process	DNA biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	binding site for residue MG A 801

Chain	Residue
A	ASP7
A	SER269
A	ASP363

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site_id	AC2
Number of Residues	1
Details	binding site for residue MG A 802

Chain	Residue
A	ASP169

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site_id	AC3
Number of Residues	1
Details	binding site for residue MG A 803

Chain	Residue
A	GLU171

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site_id	AC4
Number of Residues	3
Details	binding site for residue MG B 801

Chain	Residue
B	ASP7
B	SER269
B	ASP363

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site_id	AC5
Number of Residues	1
Details	binding site for residue MG B 802

Chain	Residue
B	ASP169

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site_id	AC6
Number of Residues	1
Details	binding site for residue MG B 803

Chain	Residue
B	GLU171

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Functional Information from PROSITE/UniProt

site_id	PS00116
Number of Residues	9
Details	DNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSLFV

Chain	Residue	Details
A	TYR558-VAL566

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