Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MAT

Structure of human Sirtuin 2 in complex with a selective thienopyrimidinone based inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0017136molecular_functionNAD-dependent histone deacetylase activity
A0051287molecular_functionNAD binding
A0070403molecular_functionNAD+ binding
C0017136molecular_functionNAD-dependent histone deacetylase activity
C0051287molecular_functionNAD binding
C0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS195
ACYS200
ACYS221
ACYS224

site_idAC2
Number of Residues15
Detailsbinding site for residue 7KJ A 402
ChainResidue
ALEU138
ATYR139
APHE143
AILE169
ATHR171
APHE190
AVAL233
APHE235
AHOH632
AHOH646
AILE93
APRO94
APHE96
APHE119
AALA135

site_idAC3
Number of Residues9
Detailsbinding site for residue SO4 A 403
ChainResidue
AGLY84
AALA85
AGLN167
ATHR262
ASER263
AVAL266
AHOH508
AHOH537
AHOH586

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 404
ChainResidue
AALA290
AGLY291
AGLN292
ASER293
AHOH574

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 405
ChainResidue
APRO277
ALEU278
ASER279
AHOH724

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 A 406
ChainResidue
ALYS158
ATRP337
AHOH653

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 407
ChainResidue
AGLN292
AHOH546
AHOH568

site_idAC8
Number of Residues3
Detailsbinding site for residue SO4 A 408
ChainResidue
APRO240
AALA241
AHOH668

site_idAC9
Number of Residues3
Detailsbinding site for residue SO4 A 409
ChainResidue
AARG78
ALYS253
AHOH690

site_idAD1
Number of Residues7
Detailsbinding site for residue SO4 A 410
ChainResidue
AGLU333
AGLY336
ATRP337
ALYS338
ALYS339
AHOH610
AHOH669

site_idAD2
Number of Residues5
Detailsbinding site for residue PG4 A 411
ChainResidue
ALEU329
ALYS338
AGLU342
AHOH511
AHOH623

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CCYS195
CCYS200
CCYS221
CCYS224

site_idAD4
Number of Residues14
Detailsbinding site for residue P6G C 402
ChainResidue
ASER274
AALA276
AGLY304
AGLY305
CALA276
CLEU278
CGLY302
CLEU303
CGLY304
CGLY305
CTYR315
CARG316
CHOH521
CHOH532

site_idAD5
Number of Residues6
Detailsbinding site for residue SO4 C 403
ChainResidue
CALA290
CGLY291
CGLN292
CSER293
CHOH537
CHOH570

site_idAD6
Number of Residues7
Detailsbinding site for residue SO4 C 404
ChainResidue
CALA332
CGLU333
CGLY336
CTRP337
CLYS338
CLYS339
CHOH556

site_idAD7
Number of Residues3
Detailsbinding site for residue SO4 C 405
ChainResidue
CLYS312
CHOH575
CHOH660

site_idAD8
Number of Residues3
Detailsbinding site for residue SO4 C 406
ChainResidue
CPRO240
CALA241
CHOH602

site_idAD9
Number of Residues9
Detailsbinding site for residue SO4 C 407
ChainResidue
CTHR262
CSER263
CLEU264
CGLN265
CVAL266
CHOH501
CHOH518
CHOH526
CARG97

site_idAE1
Number of Residues3
Detailsbinding site for residue SO4 C 408
ChainResidue
CARG78
CLYS253
CHOH614

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00236
ChainResidueDetails
AHIS187
CHIS187

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:25672491, ECO:0007744|PDB:4RMG
ChainResidueDetails
AALA85
CTHR262
CASN286
CCYS324
AASP95
AGLN167
ATHR262
AASN286
ACYS324
CALA85
CASP95
CGLN167

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00236, ECO:0000269|PubMed:11427894, ECO:0000269|PubMed:23454361, ECO:0000269|PubMed:24389023, ECO:0000269|PubMed:25672491, ECO:0000269|PubMed:25704306, ECO:0007744|PDB:4R8M
ChainResidueDetails
ACYS195
ACYS200
ACYS221
ACYS224
CCYS195
CCYS200
CCYS221
CCYS224

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q5RJQ4
ChainResidueDetails
ASER100
ASER207
CSER100
CSER207

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon