Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M99

Functional Characterization and Crystal Structure of Thermostable Amylase from Thermotoga petrophila, reveals High Thermostability and an Archaic form of Dimerization

Functional Information from GO Data
ChainGOidnamespacecontents
A0004556molecular_functionalpha-amylase activity
A0005975biological_processcarbohydrate metabolic process
A0009313biological_processoligosaccharide catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0043169molecular_functioncation binding
A0046872molecular_functionmetal ion binding
B0004556molecular_functionalpha-amylase activity
B0005975biological_processcarbohydrate metabolic process
B0009313biological_processoligosaccharide catabolic process
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0043169molecular_functioncation binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NA A 601
ChainResidue
AGLY401
AASP406
ACYS408
AASP411
AASP412

site_idAC2
Number of Residues6
Detailsbinding site for residue NA A 602
ChainResidue
AASP50
AHOH867
AASP42
AASP44
AASP46
AVAL48

site_idAC3
Number of Residues7
Detailsbinding site for residue NA A 603
ChainResidue
AASN122
AASP183
AHIS217
AILE218
AHOH701
AHOH729
AHOH778

site_idAC4
Number of Residues7
Detailsbinding site for residue NA A 604
ChainResidue
ALYS216
AHIS217
ATYR219
AASP225
AGLY226
AHOH787
AHOH826

site_idAC5
Number of Residues6
Detailsbinding site for residue K A 605
ChainResidue
ATYR83
AASP213
AEDO611
AHOH929
AHOH943
AHOH977

site_idAC6
Number of Residues6
Detailsbinding site for residue CA A 606
ChainResidue
AASP411
AASP412
AASP415
APHE417
AHOH732
AHOH761

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO A 607
ChainResidue
ATRP361
AHIS362
AGLY363
AHOH711
BTRP361
BEDO607
BHOH713

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO A 608
ChainResidue
ATHR259
AASN291
AHOH727
AHOH961
AHOH1001

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 609
ChainResidue
AGLU423
AASN424
AARG434

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 610
ChainResidue
ATYR143
ATYR146
AHOH829

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 611
ChainResidue
ATYR83
AHIS123
APHE177
AASP213
AK605
AHOH977

site_idAD3
Number of Residues5
Detailsbinding site for residue EDO A 612
ChainResidue
AILE148
ATYR219
AGLY220
ATRP221
AHOH701

site_idAD4
Number of Residues7
Detailsbinding site for residue TRS A 613
ChainResidue
AGLU421
AASP425
AHOH752
AHOH822
AHOH878
BALA378
BHOH755

site_idAD5
Number of Residues5
Detailsbinding site for residue NA B 601
ChainResidue
BGLY401
BASP406
BCYS408
BASP411
BASP412

site_idAD6
Number of Residues6
Detailsbinding site for residue NA B 602
ChainResidue
BASP42
BASP44
BASP46
BVAL48
BASP50
BHOH809

site_idAD7
Number of Residues7
Detailsbinding site for residue NA B 603
ChainResidue
BASN122
BASP183
BHIS217
BILE218
BHOH710
BHOH712
BHOH757

site_idAD8
Number of Residues6
Detailsbinding site for residue NA B 604
ChainResidue
BLYS216
BHIS217
BTYR219
BASP225
BHOH877
BHOH879

site_idAD9
Number of Residues6
Detailsbinding site for residue K B 605
ChainResidue
BEDO616
BHOH820
BHOH1018
BHOH1037
BTYR83
BASP213

site_idAE1
Number of Residues6
Detailsbinding site for residue CA B 606
ChainResidue
BASP411
BASP412
BASP415
BPHE417
BHOH726
BHOH774

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO B 607
ChainResidue
AEDO607
AHOH711
AHOH715
BHIS362
BGLY363

site_idAE3
Number of Residues4
Detailsbinding site for residue EDO B 608
ChainResidue
AASN424
BASP415
BGLY416
BHOH753

site_idAE4
Number of Residues5
Detailsbinding site for residue EDO B 609
ChainResidue
BLYS57
BTRP376
BVAL419
BGLU423
BEDO611

site_idAE5
Number of Residues5
Detailsbinding site for residue EDO B 610
ChainResidue
BILE148
BTYR219
BGLY220
BTRP221
BHOH710

site_idAE6
Number of Residues6
Detailsbinding site for residue EDO B 611
ChainResidue
BASP59
BTYR60
BLYS63
BGLU423
BARG434
BEDO609

site_idAE7
Number of Residues2
Detailsbinding site for residue EDO B 612
ChainResidue
BGLU110
BHOH714

site_idAE8
Number of Residues4
Detailsbinding site for residue EDO B 613
ChainResidue
BTHR259
BASN291
BHOH893
BHOH910

site_idAE9
Number of Residues4
Detailsbinding site for residue EDO B 614
ChainResidue
BSER263
BTYR265
BGLU295
BHOH857

site_idAF1
Number of Residues4
Detailsbinding site for residue EDO B 615
ChainResidue
BVAL107
BGLU110
BASN111
BHOH756

site_idAF2
Number of Residues5
Detailsbinding site for residue EDO B 616
ChainResidue
BTYR83
BHIS123
BASP213
BK605
BHOH1037

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon