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5M42

Structure of Thermus thermophilus L-proline dehydrogenase lacking alpha helices A, B and C

Functional Information from GO Data
ChainGOidnamespacecontents
A0004657molecular_functionproline dehydrogenase activity
A0006562biological_processL-proline catabolic process
A0010133biological_processobsolete L-proline catabolic process to L-glutamate
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue FMN A 2001
ChainResidue
AASP133
AALA225
ATHR226
AHIS227
ALEU254
ATYR275
AHOH2102
AHOH2121
AMET134
AVAL161
AGLN163
AARG184
AVAL186
ALYS187
AGLY188
AALA189

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"source":"PubMed","id":"18426222","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q9RW55","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17344208","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18426222","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2EKG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2G37","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17344208","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2G37","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsSite: {"description":"Critical for catalytic activity","evidences":[{"source":"PubMed","id":"18426222","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

248942

PDB entries from 2026-02-11

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