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5LVD

Thermolysin in complex with inhibitor (JC67)

Functional Information from GO Data
ChainGOidnamespacecontents
E0004222molecular_functionmetalloendopeptidase activity
E0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN E 401
ChainResidue
EHIS142
EHIS146
EGLU166
E79F410

site_idAC2
Number of Residues6
Detailsbinding site for residue CA E 402
ChainResidue
EHOH587
EASP138
EGLU177
EASP185
EGLU187
EGLU190

site_idAC3
Number of Residues6
Detailsbinding site for residue CA E 403
ChainResidue
EASP57
EASP59
EGLN61
EHOH580
EHOH582
EHOH775

site_idAC4
Number of Residues6
Detailsbinding site for residue CA E 404
ChainResidue
ETYR193
ETHR194
EILE197
EASP200
EHOH581
EHOH760

site_idAC5
Number of Residues6
Detailsbinding site for residue CA E 405
ChainResidue
EGLU177
EASN183
EASP185
EGLU190
EHOH540
EHOH563

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL E 406
ChainResidue
EPHE114
ETRP115
EHIS146
ETYR157
E79F410
EHOH514
EHOH562
EHOH711

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL E 407
ChainResidue
EGLY109
ETYR110
EASN111
EASN112
EGLN158
EHOH620
EHOH639
EHOH703

site_idAC8
Number of Residues5
Detailsbinding site for residue DMS E 408
ChainResidue
ETYR110
EASN112
EPHE114
E79F410
E79F410

site_idAC9
Number of Residues6
Detailsbinding site for residue DMS E 409
ChainResidue
ETYR66
EHIS216
ESER218
ETYR251
EHOH849
EHOH872

site_idAD1
Number of Residues23
Detailsbinding site for residue 79F E 410
ChainResidue
ETYR106
EASN111
EASN112
EALA113
EPHE114
ETRP115
EPHE130
EVAL139
EHIS142
EGLU143
EHIS146
ETYR157
EGLU166
ELEU202
EARG203
EHIS231
EZN401
EGOL406
EDMS408
EDMS408
EHOH502
EHOH508
EHOH529

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VVAHELTHAV
ChainResidueDetails
EVAL139-VAL148

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"4808703","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"4808703","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 176
ChainResidueDetails

246031

PDB entries from 2025-12-10

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