5LMP
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1C)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015935 | cellular_component | small ribosomal subunit |
| B | 0019843 | molecular_function | rRNA binding |
| B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003729 | molecular_function | mRNA binding |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0019843 | molecular_function | rRNA binding |
| C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0015935 | cellular_component | small ribosomal subunit |
| D | 0019843 | molecular_function | rRNA binding |
| D | 0042274 | biological_process | ribosomal small subunit biogenesis |
| D | 0046872 | molecular_function | metal ion binding |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0015935 | cellular_component | small ribosomal subunit |
| E | 0019843 | molecular_function | rRNA binding |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0003723 | molecular_function | RNA binding |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0019843 | molecular_function | rRNA binding |
| F | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0000049 | molecular_function | tRNA binding |
| G | 0003723 | molecular_function | RNA binding |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 0015935 | cellular_component | small ribosomal subunit |
| G | 0019843 | molecular_function | rRNA binding |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003723 | molecular_function | RNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005840 | cellular_component | ribosome |
| H | 0006412 | biological_process | translation |
| H | 0019843 | molecular_function | rRNA binding |
| H | 1990904 | cellular_component | ribonucleoprotein complex |
| I | 0000049 | molecular_function | tRNA binding |
| I | 0003723 | molecular_function | RNA binding |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 0015935 | cellular_component | small ribosomal subunit |
| I | 0019843 | molecular_function | rRNA binding |
| I | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0000049 | molecular_function | tRNA binding |
| J | 0003723 | molecular_function | RNA binding |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005840 | cellular_component | ribosome |
| J | 0006412 | biological_process | translation |
| J | 0019843 | molecular_function | rRNA binding |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0003723 | molecular_function | RNA binding |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0019843 | molecular_function | rRNA binding |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0000049 | molecular_function | tRNA binding |
| L | 0003723 | molecular_function | RNA binding |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0015935 | cellular_component | small ribosomal subunit |
| L | 0019843 | molecular_function | rRNA binding |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| M | 0000049 | molecular_function | tRNA binding |
| M | 0003676 | molecular_function | nucleic acid binding |
| M | 0003723 | molecular_function | RNA binding |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005829 | cellular_component | cytosol |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 0015935 | cellular_component | small ribosomal subunit |
| M | 0019843 | molecular_function | rRNA binding |
| M | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003723 | molecular_function | RNA binding |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005840 | cellular_component | ribosome |
| N | 0006412 | biological_process | translation |
| N | 0008270 | molecular_function | zinc ion binding |
| N | 0015935 | cellular_component | small ribosomal subunit |
| N | 0019843 | molecular_function | rRNA binding |
| N | 0046872 | molecular_function | metal ion binding |
| N | 1990904 | cellular_component | ribonucleoprotein complex |
| O | 0003723 | molecular_function | RNA binding |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005737 | cellular_component | cytoplasm |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0019843 | molecular_function | rRNA binding |
| O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005737 | cellular_component | cytoplasm |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0015935 | cellular_component | small ribosomal subunit |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0003723 | molecular_function | RNA binding |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0019843 | molecular_function | rRNA binding |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 0003723 | molecular_function | RNA binding |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 0019843 | molecular_function | rRNA binding |
| R | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| S | 0000028 | biological_process | ribosomal small subunit assembly |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| S | 0015935 | cellular_component | small ribosomal subunit |
| S | 0019843 | molecular_function | rRNA binding |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0003723 | molecular_function | RNA binding |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0015935 | cellular_component | small ribosomal subunit |
| T | 0019843 | molecular_function | rRNA binding |
| T | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| V | 0003723 | molecular_function | RNA binding |
| V | 0005840 | cellular_component | ribosome |
| V | 0019843 | molecular_function | rRNA binding |
| V | 1990904 | cellular_component | ribonucleoprotein complex |
| W | 0003723 | molecular_function | RNA binding |
| W | 0003743 | molecular_function | translation initiation factor activity |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005829 | cellular_component | cytosol |
| W | 0006412 | biological_process | translation |
| W | 0006413 | biological_process | translational initiation |
| W | 0019843 | molecular_function | rRNA binding |
| W | 0043022 | molecular_function | ribosome binding |
| X | 0003743 | molecular_function | translation initiation factor activity |
| X | 0005737 | cellular_component | cytoplasm |
| X | 0005829 | cellular_component | cytosol |
| X | 0006412 | biological_process | translation |
| X | 0006413 | biological_process | translational initiation |
| X | 0016020 | cellular_component | membrane |
| X | 0032790 | biological_process | ribosome disassembly |
| X | 0043022 | molecular_function | ribosome binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1601 |
| Chain | Residue |
| A | G1392 |
| A | A1502 |
| A | A1503 |
| A | G1530 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1602 |
| Chain | Residue |
| A | G251 |
| A | U252 |
| A | G266 |
| A | C267 |
| Q | LYS67 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1603 |
| Chain | Residue |
| A | A315 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1604 |
| Chain | Residue |
| A | G148 |
| A | A172 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1605 |
| Chain | Residue |
| A | U1510 |
| A | G1511 |
| A | U1512 |
| A | U1522 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 1606 |
| Chain | Residue |
| A | U12 |
| A | U13 |
| A | U14 |
| A | C526 |
| A | G527 |
| A | A914 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1607 |
| Chain | Residue |
| A | G107 |
| A | G324 |
| A | A325 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1608 |
| Chain | Residue |
| A | U793 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1609 |
| Chain | Residue |
| A | A787 |
| A | U788 |
| site_id | AD1 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1611 |
| Chain | Residue |
| A | A1500 |
| A | G1504 |
| A | G1505 |
| A | A1507 |
| A | G1508 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1612 |
| Chain | Residue |
| A | C121 |
| A | G124 |
| A | U125 |
| A | G126 |
| A | G236 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1613 |
| Chain | Residue |
| A | U180 |
| A | G181 |
| A | C194 |
| A | A195 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1614 |
| Chain | Residue |
| A | C748 |
| A | C749 |
| A | G750 |
| site_id | AD5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1615 |
| Chain | Residue |
| A | G309 |
| site_id | AD6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1616 |
| Chain | Residue |
| A | G371 |
| A | C372 |
| site_id | AD7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1617 |
| Chain | Residue |
| A | C48 |
| A | U114 |
| A | G115 |
| site_id | AD8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1618 |
| Chain | Residue |
| A | C504 |
| A | G505 |
| site_id | AD9 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1619 |
| Chain | Residue |
| A | A563 |
| A | C564 |
| A | U565 |
| A | G566 |
| A | G567 |
| site_id | AE1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1620 |
| Chain | Residue |
| A | U287 |
| site_id | AE2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1621 |
| Chain | Residue |
| A | G579 |
| A | G758 |
| site_id | AE3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1623 |
| Chain | Residue |
| A | C290 |
| A | C291 |
| site_id | AE4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1624 |
| Chain | Residue |
| A | C58 |
| A | A59 |
| A | C386 |
| A | U387 |
| site_id | AE5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1625 |
| Chain | Residue |
| A | A816 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1627 |
| Chain | Residue |
| A | A572 |
| A | A573 |
| A | A574 |
| site_id | AE7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1628 |
| Chain | Residue |
| A | G854 |
| site_id | AE8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1629 |
| Chain | Residue |
| A | A431 |
| site_id | AE9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1630 |
| Chain | Residue |
| A | A609 |
| A | G610 |
| site_id | AF1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1631 |
| Chain | Residue |
| A | G581 |
| A | G758 |
| site_id | AF2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1632 |
| Chain | Residue |
| A | G576 |
| site_id | AF3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1633 |
| Chain | Residue |
| A | C355 |
| A | G357 |
| site_id | AF4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1634 |
| Chain | Residue |
| A | G903 |
| A | U1512 |
| site_id | AF5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1635 |
| Chain | Residue |
| A | A768 |
| site_id | AF6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1636 |
| Chain | Residue |
| A | A766 |
| A | C812 |
| site_id | AF7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1637 |
| Chain | Residue |
| A | G251 |
| A | A270 |
| site_id | AF8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1638 |
| Chain | Residue |
| A | U13 |
| A | A915 |
| A | G916 |
| site_id | AF9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1639 |
| Chain | Residue |
| A | A782 |
| A | A794 |
| site_id | AG1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1640 |
| Chain | Residue |
| A | U921 |
| A | G922 |
| A | U1393 |
| site_id | AG2 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1641 |
| Chain | Residue |
| A | U1528 |
| A | C817 |
| A | G818 |
| A | A819 |
| A | C1527 |
| site_id | AG3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1642 |
| Chain | Residue |
| A | A559 |
| A | U560 |
| site_id | AG4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1644 |
| Chain | Residue |
| A | G595 |
| A | C596 |
| A | G597 |
| A | U598 |
| site_id | AG5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1645 |
| Chain | Residue |
| A | A781 |
| site_id | AG6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1646 |
| Chain | Residue |
| A | U804 |
| site_id | AG7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1647 |
| Chain | Residue |
| A | G41 |
| site_id | AG8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1648 |
| Chain | Residue |
| A | A572 |
| site_id | AG9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1649 |
| Chain | Residue |
| A | G1416 |
| A | G1417 |
| site_id | AH1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1650 |
| Chain | Residue |
| A | G331 |
| A | G351 |
| A | C352 |
| site_id | AH2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1651 |
| Chain | Residue |
| A | G361 |
| A | G362 |
| site_id | AH3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1652 |
| Chain | Residue |
| A | G406 |
| site_id | AH4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1653 |
| Chain | Residue |
| A | U20 |
| E | GLY124 |
| site_id | AH5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1654 |
| Chain | Residue |
| A | G21 |
| site_id | AH6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1655 |
| Chain | Residue |
| A | G895 |
| site_id | AH7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1656 |
| Chain | Residue |
| A | G35 |
| A | C36 |
| A | C398 |
| site_id | AH8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1658 |
| Chain | Residue |
| A | G324 |
| site_id | AH9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1659 |
| Chain | Residue |
| A | G377 |
| site_id | AI1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1661 |
| Chain | Residue |
| A | U437 |
| A | G438 |
| site_id | AI2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1662 |
| Chain | Residue |
| A | A109 |
| A | A329 |
| A | G331 |
| site_id | AI3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1663 |
| Chain | Residue |
| A | C314 |
| A | C328 |
| A | C330 |
| site_id | AI4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1665 |
| Chain | Residue |
| A | C355 |
| site_id | AI5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1666 |
| Chain | Residue |
| A | U359 |
| site_id | AI6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1667 |
| Chain | Residue |
| A | G617 |
| A | A621 |
| site_id | AI7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1670 |
| Chain | Residue |
| A | G660 |
| A | G661 |
| site_id | AI8 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1671 |
| Chain | Residue |
| A | G506 |
| A | C508 |
| A | A509 |
| A | A510 |
| site_id | AI9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1672 |
| Chain | Residue |
| A | G332 |
| A | G333 |
| site_id | AJ1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1673 |
| Chain | Residue |
| A | G858 |
| A | G869 |
| site_id | AJ2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1674 |
| Chain | Residue |
| A | A860 |
| site_id | AJ3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1675 |
| Chain | Residue |
| A | G727 |
| site_id | AJ4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1676 |
| Chain | Residue |
| A | C569 |
| A | G570 |
| site_id | AJ5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1677 |
| Chain | Residue |
| A | G316 |
| site_id | AJ6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1678 |
| Chain | Residue |
| A | A53 |
| A | A353 |
| site_id | AJ7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1679 |
| Chain | Residue |
| A | G64 |
| A | A383 |
| site_id | AJ8 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1680 |
| Chain | Residue |
| A | A116 |
| A | G117 |
| A | A288 |
| A | G289 |
| site_id | AJ9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1681 |
| Chain | Residue |
| A | G752 |
| site_id | AK1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1682 |
| Chain | Residue |
| A | G587 |
| A | G588 |
| site_id | AK2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1684 |
| Chain | Residue |
| A | A547 |
| A | G548 |
| site_id | AK3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1685 |
| Chain | Residue |
| A | G396 |
| site_id | AK4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1686 |
| Chain | Residue |
| A | G46 |
| A | C366 |
| A | G394 |
| site_id | AK5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1688 |
| Chain | Residue |
| A | A918 |
| site_id | AK6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1691 |
| Chain | Residue |
| A | A608 |
| site_id | AK7 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1692 |
| Chain | Residue |
| A | U1498 |
| A | A1499 |
| A | A1500 |
| A | G1504 |
| A | G1505 |
| site_id | AK8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1693 |
| Chain | Residue |
| A | C936 |
| site_id | AK9 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1694 |
| Chain | Residue |
| A | G577 |
| A | C578 |
| A | U820 |
| site_id | AL1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1695 |
| Chain | Residue |
| A | C1076 |
| site_id | AL2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1696 |
| Chain | Residue |
| A | C779 |
| A | A780 |
| K | LYS122 |
| site_id | AL3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1697 |
| Chain | Residue |
| A | A583 |
| A | G585 |
| site_id | AL4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1698 |
| Chain | Residue |
| A | U45 |
| site_id | AL5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1699 |
| Chain | Residue |
| A | U239 |
| site_id | AL6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1700 |
| Chain | Residue |
| A | G830 |
| site_id | AL7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1701 |
| Chain | Residue |
| A | G299 |
| A | G557 |
| A | G558 |
| site_id | AL8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1702 |
| Chain | Residue |
| A | C536 |
| A | G537 |
| site_id | AL9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1703 |
| Chain | Residue |
| A | A759 |
| A | G760 |
| site_id | AM1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1704 |
| Chain | Residue |
| A | G265 |
| site_id | AM2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1705 |
| Chain | Residue |
| A | G64 |
| site_id | AM3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1707 |
| Chain | Residue |
| A | C503 |
| site_id | AM4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1708 |
| Chain | Residue |
| A | C519 |
| A | A520 |
| W | THR6 |
| site_id | AM5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN D 300 |
| Chain | Residue |
| D | CYS9 |
| D | LYS22 |
| D | CYS26 |
| D | CYS31 |
| site_id | AM6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN N 101 |
| Chain | Residue |
| N | CYS24 |
| N | VAL25 |
| N | ARG26 |
| N | CYS27 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA |
| Chain | Residue | Details |
| G | ASP20-ALA46 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR |
| Chain | Residue | Details |
| H | GLY108-ARG125 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN |
| Chain | Residue | Details |
| K | ILE95-ASN117 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR |
| Chain | Residue | Details |
| L | LYS46-ARG53 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS |
| Chain | Residue | Details |
| Q | GLY54-SER66 |
| site_id | PS00057 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR |
| Chain | Residue | Details |
| R | ARG32-ARG55 |
| site_id | PS00063 |
| Number of Residues | 16 |
| Details | ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF |
| Chain | Residue | Details |
| R | LEU66-PHE81 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT |
| Chain | Residue | Details |
| S | ASN53-THR77 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL |
| Chain | Residue | Details |
| I | GLY67-LEU85 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT |
| Chain | Residue | Details |
| J | ALA27-THR42 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY |
| Chain | Residue | Details |
| O | LEU39-TYR69 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR |
| Chain | Residue | Details |
| N | ARG23-ARG45 |
| site_id | PS00548 |
| Number of Residues | 35 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG |
| Chain | Residue | Details |
| C | ALA163-GLY197 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV |
| Chain | Residue | Details |
| E | GLY23-VAL55 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV |
| Chain | Residue | Details |
| D | LEU97-VAL121 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ |
| Chain | Residue | Details |
| M | ARG88-GLN101 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG |
| Chain | Residue | Details |
| B | VAL7-GLY18 |
| site_id | PS01048 |
| Number of Residues | 10 |
| Details | RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA |
| Chain | Residue | Details |
| F | GLY44-ALA53 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 45 |
| Details | Coiled coil: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 68 |
| Details | Domain: {"description":"KH type-2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 62 |
| Details | Domain: {"description":"S4 RNA-binding"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"11866529","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 63 |
| Details | Domain: {"description":"S5 DRBM"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 20 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 21 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"source":"PubMed","id":"16287167","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25775268","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
