Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5LFB

Structure of the bacterial sex F pilus (12.5 Angstrom rise)

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
1A	0005576	cellular_component	extracellular region
1B	0005576	cellular_component	extracellular region
1C	0005576	cellular_component	extracellular region
1D	0005576	cellular_component	extracellular region
1E	0005576	cellular_component	extracellular region
1F	0005576	cellular_component	extracellular region
1G	0005576	cellular_component	extracellular region
1H	0005576	cellular_component	extracellular region
1I	0005576	cellular_component	extracellular region
1J	0005576	cellular_component	extracellular region
1K	0005576	cellular_component	extracellular region
1L	0005576	cellular_component	extracellular region
1M	0005576	cellular_component	extracellular region
1N	0005576	cellular_component	extracellular region
1O	0005576	cellular_component	extracellular region
2A	0005576	cellular_component	extracellular region
2B	0005576	cellular_component	extracellular region
2C	0005576	cellular_component	extracellular region
2D	0005576	cellular_component	extracellular region
2E	0005576	cellular_component	extracellular region
2F	0005576	cellular_component	extracellular region
2G	0005576	cellular_component	extracellular region
2H	0005576	cellular_component	extracellular region
2I	0005576	cellular_component	extracellular region
2J	0005576	cellular_component	extracellular region
2K	0005576	cellular_component	extracellular region
2L	0005576	cellular_component	extracellular region
2M	0005576	cellular_component	extracellular region
2N	0005576	cellular_component	extracellular region
2O	0005576	cellular_component	extracellular region
3A	0005576	cellular_component	extracellular region
3B	0005576	cellular_component	extracellular region
3C	0005576	cellular_component	extracellular region
3D	0005576	cellular_component	extracellular region
3E	0005576	cellular_component	extracellular region
3F	0005576	cellular_component	extracellular region
3G	0005576	cellular_component	extracellular region
3H	0005576	cellular_component	extracellular region
3I	0005576	cellular_component	extracellular region
3J	0005576	cellular_component	extracellular region
3K	0005576	cellular_component	extracellular region
3L	0005576	cellular_component	extracellular region
3M	0005576	cellular_component	extracellular region
3N	0005576	cellular_component	extracellular region
3O	0005576	cellular_component	extracellular region
4A	0005576	cellular_component	extracellular region
4B	0005576	cellular_component	extracellular region
4C	0005576	cellular_component	extracellular region
4D	0005576	cellular_component	extracellular region
4E	0005576	cellular_component	extracellular region
4F	0005576	cellular_component	extracellular region
4G	0005576	cellular_component	extracellular region
4H	0005576	cellular_component	extracellular region
4I	0005576	cellular_component	extracellular region
4J	0005576	cellular_component	extracellular region
4K	0005576	cellular_component	extracellular region
4L	0005576	cellular_component	extracellular region
4M	0005576	cellular_component	extracellular region
4N	0005576	cellular_component	extracellular region
4O	0005576	cellular_component	extracellular region
5A	0005576	cellular_component	extracellular region
5B	0005576	cellular_component	extracellular region
5C	0005576	cellular_component	extracellular region
5D	0005576	cellular_component	extracellular region
5E	0005576	cellular_component	extracellular region
5F	0005576	cellular_component	extracellular region
5G	0005576	cellular_component	extracellular region
5H	0005576	cellular_component	extracellular region
5I	0005576	cellular_component	extracellular region
5J	0005576	cellular_component	extracellular region
5K	0005576	cellular_component	extracellular region
5L	0005576	cellular_component	extracellular region
5M	0005576	cellular_component	extracellular region
5N	0005576	cellular_component	extracellular region
5O	0005576	cellular_component	extracellular region

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue 6V6 1A 101

Chain	Residue
1A	LYS49

site_id	AC2
Number of Residues	2
Details	binding site for residue 6V6 1B 101

Chain	Residue
1B	LYS49
5A	VAL37

site_id	AC3
Number of Residues	1
Details	binding site for residue 6V6 1C 101

Chain	Residue
5B	VAL37

site_id	AC4
Number of Residues	3
Details	binding site for residue 6V6 1D 101

Chain	Residue
1D	VAL48
1D	LYS49
5C	VAL37

site_id	AC5
Number of Residues	2
Details	binding site for residue 6V6 1E 101

Chain	Residue
1E	LYS49
5D	VAL37

site_id	AC6
Number of Residues	2
Details	binding site for residue 6V6 1F 101

Chain	Residue
1F	LYS49
5E	VAL37

site_id	AC7
Number of Residues	2
Details	binding site for residue 6V6 1G 101

Chain	Residue
1G	LYS49
5F	VAL37

site_id	AC8
Number of Residues	3
Details	binding site for residue 6V6 1H 101

Chain	Residue
1H	LYS49
5G	VAL37
5G	MET41

site_id	AC9
Number of Residues	3
Details	binding site for residue 6V6 1I 101

Chain	Residue
1I	LYS49
5H	VAL37
5H	MET41

site_id	AD1
Number of Residues	3
Details	binding site for residue 6V6 1J 101

Chain	Residue
1J	LYS49
5I	VAL37
5I	MET41

site_id	AD2
Number of Residues	3
Details	binding site for residue 6V6 1K 101

Chain	Residue
1K	LYS49
5J	VAL37
5J	MET41

site_id	AD3
Number of Residues	1
Details	binding site for residue 6V6 1L 101

Chain	Residue
1L	LYS49

site_id	AD4
Number of Residues	1
Details	binding site for residue 6V6 1M 101

Chain	Residue
1M	LYS49

site_id	AD5
Number of Residues	1
Details	binding site for residue 6V6 1N 101

Chain	Residue
1N	LYS49

site_id	AD6
Number of Residues	1
Details	binding site for residue 6V6 2A 101

Chain	Residue
2A	LYS49

site_id	AD7
Number of Residues	2
Details	binding site for residue 6V6 2B 101

Chain	Residue
1A	VAL37
2B	LYS49

site_id	AD8
Number of Residues	1
Details	binding site for residue 6V6 2C 101

Chain	Residue
1B	VAL37

site_id	AD9
Number of Residues	3
Details	binding site for residue 6V6 2D 101

Chain	Residue
1C	VAL37
2D	VAL48
2D	LYS49

site_id	AE1
Number of Residues	2
Details	binding site for residue 6V6 2E 101

Chain	Residue
1D	VAL37
2E	LYS49

site_id	AE2
Number of Residues	2
Details	binding site for residue 6V6 2F 101

Chain	Residue
1E	VAL37
2F	LYS49

site_id	AE3
Number of Residues	2
Details	binding site for residue 6V6 2G 101

Chain	Residue
1F	VAL37
2G	LYS49

site_id	AE4
Number of Residues	3
Details	binding site for residue 6V6 2H 101

Chain	Residue
1G	VAL37
1H	MET44
2H	LYS49

site_id	AE5
Number of Residues	3
Details	binding site for residue 6V6 2I 101

Chain	Residue
1H	VAL37
1I	MET44
2I	LYS49

site_id	AE6
Number of Residues	3
Details	binding site for residue 6V6 2J 101

Chain	Residue
1I	VAL37
1J	MET44
2J	LYS49

site_id	AE7
Number of Residues	3
Details	binding site for residue 6V6 2K 101

Chain	Residue
1J	VAL37
1K	MET44
2K	LYS49

site_id	AE8
Number of Residues	3
Details	binding site for residue 6V6 2L 101

Chain	Residue
1K	VAL37
1L	MET44
2L	LYS49

site_id	AE9
Number of Residues	3
Details	binding site for residue 6V6 2M 101

Chain	Residue
1L	VAL37
1L	MET41
2M	LYS49

site_id	AF1
Number of Residues	3
Details	binding site for residue 6V6 2N 101

Chain	Residue
1M	VAL37
1M	MET41
2N	LYS49

site_id	AF2
Number of Residues	2
Details	binding site for residue 6V6 2O 101

Chain	Residue
1N	VAL37
1N	MET41

site_id	AF3
Number of Residues	1
Details	binding site for residue 6V6 3A 101

Chain	Residue
3A	LYS49

site_id	AF4
Number of Residues	1
Details	binding site for residue 6V6 3B 101

Chain	Residue
3B	LYS49

site_id	AF5
Number of Residues	1
Details	binding site for residue 6V6 3C 101

Chain	Residue
2B	VAL37

site_id	AF6
Number of Residues	3
Details	binding site for residue 6V6 3D 101

Chain	Residue
2C	VAL37
3D	VAL48
3D	LYS49

site_id	AF7
Number of Residues	2
Details	binding site for residue 6V6 3E 101

Chain	Residue
2D	VAL37
3E	LYS49

site_id	AF8
Number of Residues	2
Details	binding site for residue 6V6 3F 101

Chain	Residue
2E	VAL37
3F	LYS49

site_id	AF9
Number of Residues	2
Details	binding site for residue 6V6 3G 101

Chain	Residue
2F	VAL37
3G	LYS49

site_id	AG1
Number of Residues	2
Details	binding site for residue 6V6 3H 101

Chain	Residue
2G	VAL37
3H	LYS49

site_id	AG2
Number of Residues	2
Details	binding site for residue 6V6 3I 101

Chain	Residue
2H	VAL37
3I	LYS49

site_id	AG3
Number of Residues	3
Details	binding site for residue 6V6 3J 101

Chain	Residue
2I	VAL37
2I	MET41
3J	LYS49

site_id	AG4
Number of Residues	3
Details	binding site for residue 6V6 3K 101

Chain	Residue
2J	VAL37
2J	MET41
3K	LYS49

site_id	AG5
Number of Residues	3
Details	binding site for residue 6V6 3L 101

Chain	Residue
2K	VAL37
2K	MET41
3L	LYS49

site_id	AG6
Number of Residues	3
Details	binding site for residue 6V6 3M 101

Chain	Residue
2L	VAL37
2L	MET41
3M	LYS49

site_id	AG7
Number of Residues	1
Details	binding site for residue 6V6 3N 101

Chain	Residue
3N	LYS49

site_id	AG8
Number of Residues	1
Details	binding site for residue 6V6 4A 101

Chain	Residue
4A	LYS49

site_id	AG9
Number of Residues	1
Details	binding site for residue 6V6 4B 101

Chain	Residue
4B	LYS49

site_id	AH1
Number of Residues	1
Details	binding site for residue 6V6 4C 101

Chain	Residue
3B	VAL37

site_id	AH2
Number of Residues	3
Details	binding site for residue 6V6 4D 101

Chain	Residue
3C	VAL37
4D	VAL48
4D	LYS49

site_id	AH3
Number of Residues	2
Details	binding site for residue 6V6 4E 101

Chain	Residue
3D	VAL37
4E	LYS49

site_id	AH4
Number of Residues	2
Details	binding site for residue 6V6 4F 101

Chain	Residue
3E	VAL37
4F	LYS49

site_id	AH5
Number of Residues	2
Details	binding site for residue 6V6 4G 101

Chain	Residue
3F	VAL37
4G	LYS49

site_id	AH6
Number of Residues	2
Details	binding site for residue 6V6 4H 101

Chain	Residue
3G	VAL37
4H	LYS49

site_id	AH7
Number of Residues	2
Details	binding site for residue 6V6 4I 101

Chain	Residue
3H	VAL37
4I	LYS49

site_id	AH8
Number of Residues	3
Details	binding site for residue 6V6 4J 101

Chain	Residue
3I	VAL37
3I	MET41
4J	LYS49

site_id	AH9
Number of Residues	3
Details	binding site for residue 6V6 4K 101

Chain	Residue
3J	VAL37
3J	MET41
4K	LYS49

site_id	AI1
Number of Residues	3
Details	binding site for residue 6V6 4L 101

Chain	Residue
3K	VAL37
3K	MET41
4L	LYS49

site_id	AI2
Number of Residues	3
Details	binding site for residue 6V6 4M 101

Chain	Residue
3L	VAL37
3L	MET41
4M	LYS49

site_id	AI3
Number of Residues	1
Details	binding site for residue 6V6 4N 101

Chain	Residue
4N	LYS49

site_id	AI4
Number of Residues	1
Details	binding site for residue 6V6 5A 101

Chain	Residue
5A	LYS49

site_id	AI5
Number of Residues	1
Details	binding site for residue 6V6 5B 101

Chain	Residue
5B	LYS49

site_id	AI6
Number of Residues	1
Details	binding site for residue 6V6 5C 101

Chain	Residue
4B	VAL37

site_id	AI7
Number of Residues	3
Details	binding site for residue 6V6 5D 101

Chain	Residue
4C	VAL37
5D	VAL48
5D	LYS49

site_id	AI8
Number of Residues	2
Details	binding site for residue 6V6 5E 101

Chain	Residue
4D	VAL37
5E	LYS49

site_id	AI9
Number of Residues	2
Details	binding site for residue 6V6 5F 101

Chain	Residue
4E	VAL37
5F	LYS49

site_id	AJ1
Number of Residues	2
Details	binding site for residue 6V6 5G 101

Chain	Residue
4F	VAL37
5G	LYS49

site_id	AJ2
Number of Residues	2
Details	binding site for residue 6V6 5H 101

Chain	Residue
4G	VAL37
5H	LYS49

site_id	AJ3
Number of Residues	2
Details	binding site for residue 6V6 5I 101

Chain	Residue
4H	VAL37
5I	LYS49

site_id	AJ4
Number of Residues	3
Details	binding site for residue 6V6 5J 101

Chain	Residue
4I	VAL37
4I	MET41
5J	LYS49

site_id	AJ5
Number of Residues	3
Details	binding site for residue 6V6 5K 101

Chain	Residue
4J	VAL37
4J	MET41
5K	LYS49

site_id	AJ6
Number of Residues	3
Details	binding site for residue 6V6 5L 101

Chain	Residue
4K	VAL37
4K	MET41
5L	LYS49

site_id	AJ7
Number of Residues	3
Details	binding site for residue 6V6 5M 101

Chain	Residue
4L	VAL37
4L	MET41
5M	LYS49

site_id	AJ8
Number of Residues	1
Details	binding site for residue 6V6 5N 101

Chain	Residue
5N	LYS49

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	3000
Details	Transmembrane: {"description":"Helical"}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	225
Details	Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"1464628","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)