5LDP
Crystal structure of E.coli LigT complexed with ATP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004113 | molecular_function | 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0008081 | molecular_function | phosphoric diester hydrolase activity |
| A | 0008664 | molecular_function | RNA 2',3'-cyclic 3'-phosphodiesterase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016874 | molecular_function | ligase activity |
| B | 0004113 | molecular_function | 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0008081 | molecular_function | phosphoric diester hydrolase activity |
| B | 0008664 | molecular_function | RNA 2',3'-cyclic 3'-phosphodiesterase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016874 | molecular_function | ligase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue ATP A 201 |
| Chain | Residue |
| A | ARG6 |
| A | TYR166 |
| A | CL205 |
| A | MG206 |
| A | HOH337 |
| A | HOH373 |
| A | HOH396 |
| A | HOH404 |
| A | PHE8 |
| A | HIS43 |
| A | THR45 |
| A | PHE48 |
| A | ARG86 |
| A | ARG130 |
| A | SER157 |
| A | THR164 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 202 |
| Chain | Residue |
| A | ALA38 |
| A | ASN41 |
| A | HOH414 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 203 |
| Chain | Residue |
| A | GLY80 |
| A | GLN81 |
| A | HOH324 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 204 |
| Chain | Residue |
| A | THR137 |
| A | ILE138 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 205 |
| Chain | Residue |
| A | HIS125 |
| A | THR127 |
| A | ATP201 |
| A | HOH304 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 206 |
| Chain | Residue |
| A | ATP201 |
| A | HOH407 |
| site_id | AC7 |
| Number of Residues | 19 |
| Details | binding site for residue ATP B 201 |
| Chain | Residue |
| B | ARG6 |
| B | PHE8 |
| B | HIS43 |
| B | THR45 |
| B | PHE48 |
| B | ARG130 |
| B | SER157 |
| B | PHE159 |
| B | THR164 |
| B | TYR166 |
| B | ATP202 |
| B | ATP202 |
| B | MG203 |
| B | CL204 |
| B | HOH320 |
| B | HOH326 |
| B | HOH359 |
| B | HOH368 |
| B | HOH381 |
| site_id | AC8 |
| Number of Residues | 12 |
| Details | binding site for residue ATP B 202 |
| Chain | Residue |
| B | ARG6 |
| B | ARG6 |
| B | GLU51 |
| B | SER157 |
| B | SER158 |
| B | PHE159 |
| B | ATP201 |
| B | ATP201 |
| B | MG203 |
| B | HOH310 |
| B | HOH334 |
| B | HOH359 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue MG B 203 |
| Chain | Residue |
| B | ATP201 |
| B | ATP202 |
| B | HOH359 |
| site_id | AD1 |
| Number of Residues | 4 |
| Details | binding site for residue CL B 204 |
| Chain | Residue |
| B | HIS125 |
| B | THR127 |
| B | ATP201 |
| B | HOH302 |
