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5L05

Crystal structure of catalase-peroxidase KATG of burkholderia pseudomallei treated with INH

Replaces:  1MWV
Functional Information from GO Data
ChainGOidnamespacecontents
A0004096molecular_functioncatalase activity
A0004601molecular_functionperoxidase activity
A0005829cellular_componentcytosol
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0070301biological_processcellular response to hydrogen peroxide
A0098869biological_processcellular oxidant detoxification
B0004096molecular_functioncatalase activity
B0004601molecular_functionperoxidase activity
B0005829cellular_componentcytosol
B0006979biological_processresponse to oxidative stress
B0020037molecular_functionheme binding
B0042744biological_processhydrogen peroxide catabolic process
B0046872molecular_functionmetal ion binding
B0070301biological_processcellular response to hydrogen peroxide
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues24
Detailsbinding site for residue HP5 A 801
ChainResidue
AGLY104
AHIS279
AGLY282
ALYS283
ATHR284
AHIS285
ATHR323
ASER324
ATRP330
ATHR388
AOXY803
ALEU105
AHOH970
AHOH998
AHOH1022
AHOH1051
AHOH1241
AILE107
ATRP111
ATYR238
AVAL239
ALEU274
AILE275
AGLY278

site_idAC2
Number of Residues6
Detailsbinding site for residue NA A 802
ChainResidue
AGLY122
AARG123
AGLY124
ASER494
AHOH945
AHOH1058

site_idAC3
Number of Residues6
Detailsbinding site for residue OXY A 803
ChainResidue
AARG108
AHIS112
AASP141
AHP5801
AHOH913
AHOH1241

site_idAC4
Number of Residues2
Detailsbinding site for residue MPD A 804
ChainResidue
ATHR323
AHOH1814

site_idAC5
Number of Residues4
Detailsbinding site for residue MPD A 805
ChainResidue
AASP83
APRO154
AHOH1382
AHOH1519

site_idAC6
Number of Residues22
Detailsbinding site for residue HP5 B 801
ChainResidue
BGLY104
BLEU105
BILE107
BTRP111
BTYR238
BVAL239
BLEU274
BILE275
BGLY278
BHIS279
BGLY282
BLYS283
BTHR284
BHIS285
BTHR323
BSER324
BOXY803
BHOH971
BHOH999
BHOH1045
BHOH1093
BHOH1358

site_idAC7
Number of Residues6
Detailsbinding site for residue NA B 802
ChainResidue
BGLY122
BARG123
BGLY124
BSER494
BHOH958
BHOH1026

site_idAC8
Number of Residues6
Detailsbinding site for residue OXY B 803
ChainResidue
BARG108
BHIS112
BASP141
BHP5801
BHOH911
BHOH1358

site_idAC9
Number of Residues4
Detailsbinding site for residue MPD B 804
ChainResidue
BALA290
BTHR323
BSER324
BHOH969

site_idAD1
Number of Residues22
Details
ChainResidue
BHOH1123
BHOH1358
BHOH1472
BILE107
BARG108
BMET109
BALA110
BHIS112
BSER113
BALA114
BGLY115
BALA231
BVAL232
BILE237
BVAL239
BTHR260
BPHE261
BMET264
BARG426
BHP5801
BHOH906
BHOH1045

site_idAD2
Number of Residues21
Details
ChainResidue
BTRP111
BGLY115
BTYR117
BTHR119
BALA230
BALA231
BVAL232
BILE237
BVAL239
BTHR260
BPHE261
BALA262
BARG263
BALA265
BMET266
BARG426
BHP5801
BHOH906
BHOH907
BHOH1045
BHOH1123

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. TVALIAGGHTF
ChainResidueDetails
ATHR271-PHE281

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GGlfIRMaWHSA
ChainResidueDetails
AGLY103-ALA114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AHIS112
BHIS112

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AHIS279
BHIS279

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AARG108
BARG108

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Trp-Tyr) (with M-244) => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
ATRP111
BTRP111

site_idSWS_FT_FI5
Number of Residues4
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Tyr-Met) (with W-91) => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
ATYR238
AMET264
BTYR238
BMET264

222036

PDB entries from 2024-07-03

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