Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KRR

1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus in complex with Mn(2+)

Functional Information from GO Data
ChainGOidnamespacecontents
A0008299biological_processisoprenoid biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
A0030145molecular_functionmanganese ion binding
A0030604molecular_function1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
A0046872molecular_functionmetal ion binding
A0051484biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process
A0070402molecular_functionNADPH binding
B0008299biological_processisoprenoid biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
B0030145molecular_functionmanganese ion binding
B0030604molecular_function1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
B0046872molecular_functionmetal ion binding
B0051484biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process
B0070402molecular_functionNADPH binding
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue CL A 501
ChainResidue
AASP172

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO A 502
ChainResidue
ALEU122
ALYS125
APRO148
AVAL149
AASP150
AHIS153
AGLU234

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 503
ChainResidue
ALEU160
BGLN158
BLEU160
AGLN158

site_idAC4
Number of Residues6
Detailsbinding site for residue MN A 504
ChainResidue
AGLU152
AGLU231
AHOH603
AHOH629
AHOH661
AHOH679

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO B 501
ChainResidue
BLEU122
BLYS125
BPRO148
BVAL149
BASP150
BHIS153
BGLU234

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO B 502
ChainResidue
BGLN133
BGLU140
BGLY169

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO B 503
ChainResidue
BGLU152
BSER186
BSER222
BLYS228
BSER254
BHOH624

site_idAC8
Number of Residues6
Detailsbinding site for residue MN B 504
ChainResidue
BASP150
BGLU152
BGLU231
BHOH602
BHOH672
BHOH695

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues34
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00183","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

244349

PDB entries from 2025-11-05

PDB statisticsPDBj update infoContact PDBjnumon