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5KMF

Structure of CavAb in complex with nimodipine

Functional Information from GO Data
ChainGOidnamespacecontents
A0001518cellular_componentvoltage-gated sodium channel complex
A0005216molecular_functionmonoatomic ion channel activity
A0005248molecular_functionvoltage-gated sodium channel activity
A0005261molecular_functionmonoatomic cation channel activity
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0016020cellular_componentmembrane
A0035725biological_processsodium ion transmembrane transport
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0055085biological_processtransmembrane transport
A0098655biological_processmonoatomic cation transmembrane transport
B0001518cellular_componentvoltage-gated sodium channel complex
B0005216molecular_functionmonoatomic ion channel activity
B0005248molecular_functionvoltage-gated sodium channel activity
B0005261molecular_functionmonoatomic cation channel activity
B0005886cellular_componentplasma membrane
B0006811biological_processmonoatomic ion transport
B0016020cellular_componentmembrane
B0035725biological_processsodium ion transmembrane transport
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0055085biological_processtransmembrane transport
B0098655biological_processmonoatomic cation transmembrane transport
C0001518cellular_componentvoltage-gated sodium channel complex
C0005216molecular_functionmonoatomic ion channel activity
C0005248molecular_functionvoltage-gated sodium channel activity
C0005261molecular_functionmonoatomic cation channel activity
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0016020cellular_componentmembrane
C0035725biological_processsodium ion transmembrane transport
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C0055085biological_processtransmembrane transport
C0098655biological_processmonoatomic cation transmembrane transport
D0001518cellular_componentvoltage-gated sodium channel complex
D0005216molecular_functionmonoatomic ion channel activity
D0005248molecular_functionvoltage-gated sodium channel activity
D0005261molecular_functionmonoatomic cation channel activity
D0005886cellular_componentplasma membrane
D0006811biological_processmonoatomic ion transport
D0016020cellular_componentmembrane
D0035725biological_processsodium ion transmembrane transport
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
D0055085biological_processtransmembrane transport
D0098655biological_processmonoatomic cation transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue 6U9 A 1301
ChainResidue
ATHR1162
AGLY1164
AGLU1165
CTYR1195

site_idAC2
Number of Residues2
Detailsbinding site for residue MC3 A 1302
ChainResidue
APHE1203
BMET1174

site_idAC3
Number of Residues1
Detailsbinding site for residue MC3 A 1303
ChainResidue
ATYR1191

site_idAC4
Number of Residues2
Detailsbinding site for residue MC3 A 1304
ChainResidue
ASER1034
CTHR1162

site_idAC5
Number of Residues2
Detailsbinding site for residue MC3 B 1301
ChainResidue
BTHR1175
BLEU1176

site_idAC6
Number of Residues8
Detailsbinding site for residue MC3 B 1302
ChainResidue
ATYR1195
APHE1203
BMET1137
BPHE1141
BGLY1164
BPHE1167
BTYR1168
BPHE1171

site_idAC7
Number of Residues5
Detailsbinding site for residue MC3 B 1303
ChainResidue
BLEU1151
BPHE1152
BTYR1191
BTYR1193
BALA1194

site_idAC8
Number of Residues2
Detailsbinding site for residue CA C 1301
ChainResidue
AASP1178
CASP1178

site_idAC9
Number of Residues2
Detailsbinding site for residue MC3 C 1302
ChainResidue
AMET1174
CTHR1206

site_idAD1
Number of Residues1
Detailsbinding site for residue MC3 C 1303
ChainResidue
CTYR1191

site_idAD2
Number of Residues1
Detailsbinding site for residue MC3 C 1304
ChainResidue
CILE1097

site_idAD3
Number of Residues4
Detailsbinding site for residue MC3 C 1305
ChainResidue
CGLY1030
CTHR1033
CSER1034
DTHR1162

site_idAD4
Number of Residues6
Detailsbinding site for residue MC3 D 1302
ChainResidue
CGLY1164
CGLU1165
CPHE1171
DTYR1195
DILE1199
DPHE1203

site_idAD5
Number of Residues5
Detailsbinding site for residue MC3 D 1303
ChainResidue
BTYR1195
BPHE1203
DGLY1164
DGLU1165
DPHE1171

site_idAD6
Number of Residues2
Detailsbinding site for residue MC3 D 1304
ChainResidue
DSER1034
DTHR1036

225946

PDB entries from 2024-10-09

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