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5KG2

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 37 degree

Functional Information from GO Data
ChainGOidnamespacecontents
A0003684molecular_functiondamaged DNA binding
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue MN A 501
ChainResidue
AASP13
AASP115
AGLU116
AMN502
ADTP506
AHOH789
PDT8
PDA9

site_idAC2
Number of Residues7
Detailsbinding site for residue MN A 502
ChainResidue
AMET14
AASP115
AMN501
ADTP506
ADPO507
PDA9
AASP13

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 503
ChainResidue
AARG24
APRO244
ASER248
AGLY276
AHOH646
AHOH651
AHOH692
AHOH723

site_idAC4
Number of Residues7
Detailsbinding site for residue GOL A 504
ChainResidue
AGLU94
AALA95
AGLU98
AARG303
AHOH643
AHOH670
AHOH811

site_idAC5
Number of Residues9
Detailsbinding site for residue GOL A 505
ChainResidue
AASN26
AHIS28
AGLY271
AGLU273
ATYR274
AGLU277
AHOH611
AHOH627
AHOH678

site_idAC6
Number of Residues32
Detailsbinding site for residue DTP A 506
ChainResidue
AASP13
AMET14
AASP15
ACYS16
APHE17
APHE18
AILE48
AALA49
ATYR52
AARG55
AARG61
AASP115
ALYS231
AMN501
AMN502
ADPO507
AHOH634
AHOH660
AHOH662
AHOH668
AHOH758
AHOH789
AHOH808
PDT8
PDA9
PMN101
PHOH203
PHOH212
PHOH221
TDT3
TDT4
TDA5

site_idAC7
Number of Residues18
Detailsbinding site for residue DPO A 507
ChainResidue
AASP13
AMET14
AASP15
ACYS16
APHE17
ATYR52
AARG55
AARG61
AASP115
ALYS231
AMN502
ADTP506
AHOH634
AHOH662
AHOH668
AHOH758
PDA9
PMN101

site_idAC8
Number of Residues8
Detailsbinding site for residue MN P 101
ChainResidue
AARG61
ADTP506
ADPO507
AHOH660
AHOH668
AHOH758
PDA9
PHOH221

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
ChainResidueDetails
AASP13
AMET14
AASP115
AGLU116

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197
ChainResidueDetails
AARG61

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PDB entries from 2024-10-30

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