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5KG1

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 30 degree

Functional Information from GO Data
ChainGOidnamespacecontents
A0003684molecular_functiondamaged DNA binding
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue MN A 501
ChainResidue
AASP13
AASP115
AGLU116
AMN502
ADTP506
AHOH771
PDT8
PDA9

site_idAC2
Number of Residues7
Detailsbinding site for residue MN A 502
ChainResidue
AMET14
AASP115
AMN501
ADTP506
ADPO507
PDA9
AASP13

site_idAC3
Number of Residues10
Detailsbinding site for residue GOL A 503
ChainResidue
AARG24
APRO244
APHE247
ASER248
AGLY276
AGLU277
AHOH662
AHOH699
AHOH741
AHOH783

site_idAC4
Number of Residues7
Detailsbinding site for residue GOL A 504
ChainResidue
AGLU94
AALA95
AGLU98
AARG303
AHOH655
AHOH657
AHOH688

site_idAC5
Number of Residues11
Detailsbinding site for residue GOL A 505
ChainResidue
AASN26
APRO27
AHIS28
AGLY271
AILE272
AGLU273
ATYR274
AGLU277
AHOH612
AHOH613
AHOH721

site_idAC6
Number of Residues33
Detailsbinding site for residue DTP A 506
ChainResidue
AASP13
AMET14
AASP15
ACYS16
APHE17
APHE18
AILE48
AALA49
ATYR52
AARG55
AARG61
AILE114
AASP115
ALYS231
AMN501
AMN502
ADPO507
AHOH622
AHOH625
AHOH647
AHOH665
AHOH738
AHOH771
AHOH865
PDT8
PDA9
PMN101
PHOH203
PHOH210
PHOH216
TDT3
TDT4
TDA5

site_idAC7
Number of Residues18
Detailsbinding site for residue DPO A 507
ChainResidue
AASP13
AMET14
AASP15
ACYS16
APHE17
ATYR52
AARG55
AARG61
AASP115
ALYS231
AMN502
ADTP506
AHOH622
AHOH625
AHOH665
AHOH738
PDA9
PMN101

site_idAC8
Number of Residues8
Detailsbinding site for residue MN P 101
ChainResidue
AHOH738
AHOH865
PDA9
AARG61
ADTP506
ADPO507
AHOH647
AHOH665

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
ChainResidueDetails
AASP13
AMET14
AASP115
AGLU116

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197
ChainResidueDetails
AARG61

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PDB entries from 2024-04-24

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