5K7Z
Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000976 | molecular_function | transcription cis-regulatory region binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0000976 | molecular_function | transcription cis-regulatory region binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0000976 | molecular_function | transcription cis-regulatory region binding |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003700 | molecular_function | DNA-binding transcription factor activity |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0000976 | molecular_function | transcription cis-regulatory region binding |
| D | 0003677 | molecular_function | DNA binding |
| D | 0003700 | molecular_function | DNA-binding transcription factor activity |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue IVC A 301 |
| Chain | Residue |
| A | TRP169 |
| A | HOH407 |
| B | MET69 |
| B | PHE72 |
| B | VAL109 |
| B | ASP128 |
| B | LYS131 |
| B | LYS132 |
| B | THR157 |
| B | PHE161 |
| B | HOH401 |
| A | LYS172 |
| A | TRP173 |
| A | PHE174 |
| A | LYS175 |
| A | GLY178 |
| A | ARG179 |
| A | LEU180 |
| A | HOH401 |
| site_id | AC2 |
| Number of Residues | 20 |
| Details | binding site for residue IVC B 301 |
| Chain | Residue |
| A | MET69 |
| A | PHE72 |
| A | VAL109 |
| A | ASP128 |
| A | LYS131 |
| A | LYS132 |
| A | VAL135 |
| A | THR157 |
| A | PHE161 |
| A | LEU164 |
| A | LEU168 |
| B | TRP169 |
| B | LYS172 |
| B | TRP173 |
| B | PHE174 |
| B | LYS175 |
| B | GLY178 |
| B | ARG179 |
| B | LEU180 |
| B | HOH405 |
| site_id | AC3 |
| Number of Residues | 15 |
| Details | binding site for residue IVC C 301 |
| Chain | Residue |
| C | TRP169 |
| C | LYS172 |
| C | TRP173 |
| C | LYS175 |
| C | GLY178 |
| C | ARG179 |
| C | LEU180 |
| C | HOH404 |
| C | HOH405 |
| D | ASP128 |
| D | LYS131 |
| D | LYS132 |
| D | PHE161 |
| D | LEU164 |
| D | LEU168 |
| site_id | AC4 |
| Number of Residues | 19 |
| Details | binding site for residue IVC D 301 |
| Chain | Residue |
| C | VAL109 |
| C | ASP128 |
| C | LYS131 |
| C | LYS132 |
| C | TYR134 |
| C | VAL135 |
| C | PHE161 |
| C | LEU168 |
| C | HOH402 |
| D | TRP169 |
| D | LYS172 |
| D | TRP173 |
| D | PHE174 |
| D | LYS175 |
| D | GLY178 |
| D | ARG179 |
| D | LEU180 |
| D | HOH403 |
| D | HOH405 |
| site_id | AC5 |
| Number of Residues | 42 |
| Details | binding site for Di-nucleotide DG E 7 and DA F 14 |
| Chain | Residue |
| E | DG12 |
| E | DT13 |
| E | DG15 |
| F | DC2 |
| F | DT3 |
| F | DA4 |
| F | DC6 |
| F | DA8 |
| F | DT9 |
| F | DC10 |
| F | DG11 |
| F | DG12 |
| F | DT13 |
| F | DG15 |
| F | HOH101 |
| F | HOH106 |
| A | THR34 |
| A | SER35 |
| A | MET36 |
| A | THR46 |
| A | LYS47 |
| A | ALA48 |
| A | TYR51 |
| A | LYS57 |
| B | SER35 |
| C | SER35 |
| C | ALA48 |
| D | THR34 |
| D | SER35 |
| D | MET36 |
| D | LYS47 |
| D | ALA48 |
| D | TYR51 |
| D | LYS57 |
| E | DC2 |
| E | DT3 |
| E | DA4 |
| E | DC6 |
| E | DA8 |
| E | DT9 |
| E | DC10 |
| E | DG11 |
| site_id | AC6 |
| Number of Residues | 42 |
| Details | binding site for Di-nucleotide DG F 7 and DA E 14 |
| Chain | Residue |
| A | THR34 |
| A | SER35 |
| A | MET36 |
| A | THR46 |
| A | LYS47 |
| A | ALA48 |
| A | TYR51 |
| A | LYS57 |
| B | SER35 |
| C | SER35 |
| C | ALA48 |
| D | THR34 |
| D | SER35 |
| D | MET36 |
| D | LYS47 |
| D | ALA48 |
| D | TYR51 |
| D | LYS57 |
| E | DC2 |
| E | DT3 |
| E | DA4 |
| E | DC6 |
| E | DA8 |
| E | DT9 |
| E | DC10 |
| E | DG11 |
| E | DG12 |
| E | DT13 |
| E | DG15 |
| F | DC2 |
| F | DT3 |
| F | DA4 |
| F | DC6 |
| F | DA8 |
| F | DT9 |
| F | DC10 |
| F | DG11 |
| F | DG12 |
| F | DT13 |
| F | DG15 |
| F | HOH101 |
| F | HOH106 |
