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5JYG

Cryo-EM structure of the MamK filament at 6.5 A

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005856cellular_componentcytoskeleton
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0016887molecular_functionATP hydrolysis activity
A0046872molecular_functionmetal ion binding
A0110143cellular_componentmagnetosome
A0110146cellular_componentmagnetosome membrane
A0140923biological_processmagnetosome assembly
B0005524molecular_functionATP binding
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005856cellular_componentcytoskeleton
B0016020cellular_componentmembrane
B0016787molecular_functionhydrolase activity
B0016887molecular_functionATP hydrolysis activity
B0046872molecular_functionmetal ion binding
B0110143cellular_componentmagnetosome
B0110146cellular_componentmagnetosome membrane
B0140923biological_processmagnetosome assembly
C0005524molecular_functionATP binding
C0005525molecular_functionGTP binding
C0005737cellular_componentcytoplasm
C0005856cellular_componentcytoskeleton
C0016020cellular_componentmembrane
C0016787molecular_functionhydrolase activity
C0016887molecular_functionATP hydrolysis activity
C0046872molecular_functionmetal ion binding
C0110143cellular_componentmagnetosome
C0110146cellular_componentmagnetosome membrane
C0140923biological_processmagnetosome assembly
D0005524molecular_functionATP binding
D0005525molecular_functionGTP binding
D0005737cellular_componentcytoplasm
D0005856cellular_componentcytoskeleton
D0016020cellular_componentmembrane
D0016787molecular_functionhydrolase activity
D0016887molecular_functionATP hydrolysis activity
D0046872molecular_functionmetal ion binding
D0110143cellular_componentmagnetosome
D0110146cellular_componentmagnetosome membrane
D0140923biological_processmagnetosome assembly
E0005524molecular_functionATP binding
E0005525molecular_functionGTP binding
E0005737cellular_componentcytoplasm
E0005856cellular_componentcytoskeleton
E0016020cellular_componentmembrane
E0016787molecular_functionhydrolase activity
E0016887molecular_functionATP hydrolysis activity
E0046872molecular_functionmetal ion binding
E0110143cellular_componentmagnetosome
E0110146cellular_componentmagnetosome membrane
E0140923biological_processmagnetosome assembly
F0005524molecular_functionATP binding
F0005525molecular_functionGTP binding
F0005737cellular_componentcytoplasm
F0005856cellular_componentcytoskeleton
F0016020cellular_componentmembrane
F0016787molecular_functionhydrolase activity
F0016887molecular_functionATP hydrolysis activity
F0046872molecular_functionmetal ion binding
F0110143cellular_componentmagnetosome
F0110146cellular_componentmagnetosome membrane
F0140923biological_processmagnetosome assembly
G0005524molecular_functionATP binding
G0005525molecular_functionGTP binding
G0005737cellular_componentcytoplasm
G0005856cellular_componentcytoskeleton
G0016020cellular_componentmembrane
G0016787molecular_functionhydrolase activity
G0016887molecular_functionATP hydrolysis activity
G0046872molecular_functionmetal ion binding
G0110143cellular_componentmagnetosome
G0110146cellular_componentmagnetosome membrane
G0140923biological_processmagnetosome assembly
H0005524molecular_functionATP binding
H0005525molecular_functionGTP binding
H0005737cellular_componentcytoplasm
H0005856cellular_componentcytoskeleton
H0016020cellular_componentmembrane
H0016787molecular_functionhydrolase activity
H0016887molecular_functionATP hydrolysis activity
H0046872molecular_functionmetal ion binding
H0110143cellular_componentmagnetosome
H0110146cellular_componentmagnetosome membrane
H0140923biological_processmagnetosome assembly
I0005524molecular_functionATP binding
I0005525molecular_functionGTP binding
I0005737cellular_componentcytoplasm
I0005856cellular_componentcytoskeleton
I0016020cellular_componentmembrane
I0016787molecular_functionhydrolase activity
I0016887molecular_functionATP hydrolysis activity
I0046872molecular_functionmetal ion binding
I0110143cellular_componentmagnetosome
I0110146cellular_componentmagnetosome membrane
I0140923biological_processmagnetosome assembly
J0005524molecular_functionATP binding
J0005525molecular_functionGTP binding
J0005737cellular_componentcytoplasm
J0005856cellular_componentcytoskeleton
J0016020cellular_componentmembrane
J0016787molecular_functionhydrolase activity
J0016887molecular_functionATP hydrolysis activity
J0046872molecular_functionmetal ion binding
J0110143cellular_componentmagnetosome
J0110146cellular_componentmagnetosome membrane
J0140923biological_processmagnetosome assembly
K0005524molecular_functionATP binding
K0005525molecular_functionGTP binding
K0005737cellular_componentcytoplasm
K0005856cellular_componentcytoskeleton
K0016020cellular_componentmembrane
K0016787molecular_functionhydrolase activity
K0016887molecular_functionATP hydrolysis activity
K0046872molecular_functionmetal ion binding
K0110143cellular_componentmagnetosome
K0110146cellular_componentmagnetosome membrane
K0140923biological_processmagnetosome assembly
L0005524molecular_functionATP binding
L0005525molecular_functionGTP binding
L0005737cellular_componentcytoplasm
L0005856cellular_componentcytoskeleton
L0016020cellular_componentmembrane
L0016787molecular_functionhydrolase activity
L0016887molecular_functionATP hydrolysis activity
L0046872molecular_functionmetal ion binding
L0110143cellular_componentmagnetosome
L0110146cellular_componentmagnetosome membrane
L0140923biological_processmagnetosome assembly
M0005524molecular_functionATP binding
M0005525molecular_functionGTP binding
M0005737cellular_componentcytoplasm
M0005856cellular_componentcytoskeleton
M0016020cellular_componentmembrane
M0016787molecular_functionhydrolase activity
M0016887molecular_functionATP hydrolysis activity
M0046872molecular_functionmetal ion binding
M0110143cellular_componentmagnetosome
M0110146cellular_componentmagnetosome membrane
M0140923biological_processmagnetosome assembly
N0005524molecular_functionATP binding
N0005525molecular_functionGTP binding
N0005737cellular_componentcytoplasm
N0005856cellular_componentcytoskeleton
N0016020cellular_componentmembrane
N0016787molecular_functionhydrolase activity
N0016887molecular_functionATP hydrolysis activity
N0046872molecular_functionmetal ion binding
N0110143cellular_componentmagnetosome
N0110146cellular_componentmagnetosome membrane
N0140923biological_processmagnetosome assembly
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue MG A 401
ChainResidue
AASP161
AADP402

site_idAC2
Number of Residues13
Detailsbinding site for residue ADP A 402
ChainResidue
ALYS218
AGLU219
ASER222
AGLY289
AARG292
AMG401
AGLY19
ATHR20
ASER21
AGLY163
AALA164
AGLY165
ACYS215

site_idAC3
Number of Residues3
Detailsbinding site for residue MG B 401
ChainResidue
BGLU143
BASP161
BADP402

site_idAC4
Number of Residues14
Detailsbinding site for residue ADP B 402
ChainResidue
BGLY19
BTHR20
BSER21
BHIS22
BILE162
BGLY163
BALA164
BLYS218
BGLU219
BSER222
BGLY288
BGLY289
BARG292
BMG401

site_idAC5
Number of Residues2
Detailsbinding site for residue MG C 401
ChainResidue
CGLU143
CADP402

site_idAC6
Number of Residues12
Detailsbinding site for residue ADP C 402
ChainResidue
CGLY19
CTHR20
CSER21
CHIS22
CGLY163
CALA164
CGLY165
CLYS218
CGLU219
CGLY289
CARG292
CMG401

site_idAC7
Number of Residues3
Detailsbinding site for residue MG D 401
ChainResidue
DGLU143
DASP161
DADP402

site_idAC8
Number of Residues13
Detailsbinding site for residue ADP D 402
ChainResidue
DGLY19
DTHR20
DSER21
DASP76
DGLY163
DALA164
DGLY165
DCYS215
DLYS218
DGLU219
DGLY289
DARG292
DMG401

site_idAC9
Number of Residues2
Detailsbinding site for residue MG E 401
ChainResidue
EASP161
EADP402

site_idAD1
Number of Residues13
Detailsbinding site for residue ADP E 402
ChainResidue
EGLY19
ETHR20
ESER21
EGLY163
EALA164
EGLY165
ECYS215
ELYS218
EGLU219
ESER222
EGLY289
EARG292
EMG401

site_idAD2
Number of Residues3
Detailsbinding site for residue MG F 401
ChainResidue
FGLU143
FASP161
FADP402

site_idAD3
Number of Residues14
Detailsbinding site for residue ADP F 402
ChainResidue
FGLY19
FTHR20
FSER21
FHIS22
FILE162
FGLY163
FALA164
FLYS218
FGLU219
FSER222
FGLY288
FGLY289
FARG292
FMG401

site_idAD4
Number of Residues2
Detailsbinding site for residue MG G 401
ChainResidue
GGLU143
GADP402

site_idAD5
Number of Residues12
Detailsbinding site for residue ADP G 402
ChainResidue
GHIS22
GGLY163
GALA164
GGLY165
GLYS218
GGLU219
GGLY289
GARG292
GMG401
GGLY19
GTHR20
GSER21

site_idAD6
Number of Residues2
Detailsbinding site for residue MG H 401
ChainResidue
HGLU143
HADP402

site_idAD7
Number of Residues12
Detailsbinding site for residue ADP H 402
ChainResidue
HGLY19
HTHR20
HSER21
HHIS22
HGLY163
HALA164
HGLY165
HLYS218
HGLU219
HGLY289
HARG292
HMG401

site_idAD8
Number of Residues3
Detailsbinding site for residue MG I 401
ChainResidue
IGLU143
IASP161
IADP402

site_idAD9
Number of Residues13
Detailsbinding site for residue ADP I 402
ChainResidue
IGLY19
ITHR20
ISER21
IASP76
IGLY163
IALA164
IGLY165
ICYS215
ILYS218
IGLU219
IGLY289
IARG292
IMG401

site_idAE1
Number of Residues2
Detailsbinding site for residue MG J 401
ChainResidue
JASP161
JADP402

site_idAE2
Number of Residues13
Detailsbinding site for residue ADP J 402
ChainResidue
JGLY19
JTHR20
JSER21
JGLY163
JALA164
JGLY165
JCYS215
JLYS218
JGLU219
JSER222
JGLY289
JARG292
JMG401

site_idAE3
Number of Residues3
Detailsbinding site for residue MG K 401
ChainResidue
KGLU143
KASP161
KADP402

site_idAE4
Number of Residues14
Detailsbinding site for residue ADP K 402
ChainResidue
KGLY19
KTHR20
KSER21
KHIS22
KILE162
KGLY163
KALA164
KLYS218
KGLU219
KSER222
KGLY288
KGLY289
KARG292
KMG401

site_idAE5
Number of Residues2
Detailsbinding site for residue MG L 401
ChainResidue
LGLU143
LADP402

site_idAE6
Number of Residues12
Detailsbinding site for residue ADP L 402
ChainResidue
LGLY19
LTHR20
LSER21
LHIS22
LGLY163
LALA164
LGLY165
LLYS218
LGLU219
LGLY289
LARG292
LMG401

site_idAE7
Number of Residues3
Detailsbinding site for residue MG M 401
ChainResidue
MGLU143
MASP161
MADP402

site_idAE8
Number of Residues12
Detailsbinding site for residue ADP M 402
ChainResidue
MGLY19
MTHR20
MSER21
MGLY163
MALA164
MGLY165
MCYS215
MLYS218
MGLU219
MGLY289
MARG292
MMG401

site_idAE9
Number of Residues2
Detailsbinding site for residue MG N 401
ChainResidue
NASP161
NADP402

site_idAF1
Number of Residues13
Detailsbinding site for residue ADP N 402
ChainResidue
NGLY19
NTHR20
NSER21
NGLY163
NALA164
NGLY165
NCYS215
NLYS218
NGLU219
NSER222
NGLY289
NARG292
NMG401

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:27821762, ECO:0007744|PDB:5LJW
ChainResidueDetails
ALYS9
JLYS9
KLYS9
LLYS9
MLYS9
NLYS9
BLYS9
CLYS9
DLYS9
ELYS9
FLYS9
GLYS9
HLYS9
ILYS9

site_idSWS_FT_FI2
Number of Residues56
DetailsBINDING: BINDING => ECO:0000269|PubMed:27391173, ECO:0000269|PubMed:27821762, ECO:0007744|PDB:5JYG, ECO:0007744|PDB:5LJW
ChainResidueDetails
ATHR20
CASP76
CLYS218
CGLY289
DTHR20
DASP76
DLYS218
DGLY289
ETHR20
EASP76
ELYS218
AASP76
EGLY289
FTHR20
FASP76
FLYS218
FGLY289
GTHR20
GASP76
GLYS218
GGLY289
HTHR20
ALYS218
HASP76
HLYS218
HGLY289
ITHR20
IASP76
ILYS218
IGLY289
JTHR20
JASP76
JLYS218
AGLY289
JGLY289
KTHR20
KASP76
KLYS218
KGLY289
LTHR20
LASP76
LLYS218
LGLY289
MTHR20
BTHR20
MASP76
MLYS218
MGLY289
NTHR20
NASP76
NLYS218
NGLY289
BASP76
BLYS218
BGLY289
CTHR20

site_idSWS_FT_FI3
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:27821762, ECO:0007744|PDB:5LJV
ChainResidueDetails
AGLU143
JGLU143
KGLU143
LGLU143
MGLU143
NGLU143
BGLU143
CGLU143
DGLU143
EGLU143
FGLU143
GGLU143
HGLU143
IGLU143

site_idSWS_FT_FI4
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:27391173, ECO:0000269|PubMed:27821762, ECO:0000305|PubMed:21883528, ECO:0007744|PDB:5JYG, ECO:0007744|PDB:5LJW
ChainResidueDetails
AALA164
JALA164
KALA164
LALA164
MALA164
NALA164
BALA164
CALA164
DALA164
EALA164
FALA164
GALA164
HALA164
IALA164

226707

PDB entries from 2024-10-30

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