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5JVN

C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0005524molecular_functionATP binding
A0006090biological_processpyruvate metabolic process
A0009507cellular_componentchloroplast
A0015979biological_processphotosynthesis
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
A0016772molecular_functiontransferase activity, transferring phosphorus-containing groups
A0046872molecular_functionmetal ion binding
A0050242molecular_functionpyruvate, phosphate dikinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue 6NQ A 901
ChainResidue
ALYS25
AARG95
ATHR108
ALEU110
ACYS242
AMET243
AVAL244
AGLN336

site_idAC2
Number of Residues9
Detailsbinding site for residue PEP A 902
ChainResidue
AARG619
AASP622
AGLU748
AGLY769
ATHR770
AASN771
AASP772
AMG903
AARG562

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 903
ChainResidue
AARG619
AASP622
AARG669
AGLU748
AASP772
APEP902

Functional Information from PROSITE/UniProt
site_idPS00370
Number of Residues12
DetailsPEP_ENZYMES_PHOS_SITE PEP-utilizing enzymes phosphorylation site signature. GGmTsHAAVVAR
ChainResidueDetails
AGLY451-ARG462

site_idPS00742
Number of Residues19
DetailsPEP_ENZYMES_2 PEP-utilizing enzymes signature 2. EfFSFGTNDLtQMTFGysR
ChainResidueDetails
AGLU764-ARG782

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Tele-phosphohistidine intermediate","evidences":[{"source":"UniProtKB","id":"P11155","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"UniProtKB","id":"P11155","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P11155","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine; by PDRP1","evidences":[{"source":"UniProtKB","id":"P11155","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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