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5JVN

C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005524molecular_functionATP binding
A0006090biological_processpyruvate metabolic process
A0009507cellular_componentchloroplast
A0015979biological_processphotosynthesis
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016772molecular_functiontransferase activity, transferring phosphorus-containing groups
A0046872molecular_functionmetal ion binding
A0050242molecular_functionpyruvate, phosphate dikinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue 6NQ A 901
ChainResidue
ALYS25
AARG95
ATHR108
ALEU110
ACYS242
AMET243
AVAL244
AGLN336

site_idAC2
Number of Residues9
Detailsbinding site for residue PEP A 902
ChainResidue
AARG619
AASP622
AGLU748
AGLY769
ATHR770
AASN771
AASP772
AMG903
AARG562

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 903
ChainResidue
AARG619
AASP622
AARG669
AGLU748
AASP772
APEP902

Functional Information from PROSITE/UniProt
site_idPS00370
Number of Residues12
DetailsPEP_ENZYMES_PHOS_SITE PEP-utilizing enzymes phosphorylation site signature. GGmTsHAAVVAR
ChainResidueDetails
AGLY451-ARG462

site_idPS00742
Number of Residues19
DetailsPEP_ENZYMES_2 PEP-utilizing enzymes signature 2. EfFSFGTNDLtQMTFGysR
ChainResidueDetails
AGLU764-ARG782

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Tele-phosphohistidine intermediate => ECO:0000250|UniProtKB:P11155
ChainResidueDetails
AHIS456

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:P11155
ChainResidueDetails
ACYS834

site_idSWS_FT_FI3
Number of Residues7
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P11155
ChainResidueDetails
AARG562
AARG619
AGLU748
AGLY769
ATHR770
AASN771
AASP772

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine; by PDRP1 => ECO:0000250|UniProtKB:P11155
ChainResidueDetails
ATHR454

222624

PDB entries from 2024-07-17

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