5JSP
New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent Dimethylsulfoniopropionate Lyase DddQ
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016829 | molecular_function | lyase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0047869 | molecular_function | dimethylpropiothetin dethiomethylase activity |
| B | 0016829 | molecular_function | lyase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0047869 | molecular_function | dimethylpropiothetin dethiomethylase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue FE A 301 |
| Chain | Residue |
| A | HIS125 |
| A | GLU129 |
| A | TYR131 |
| A | HIS163 |
| A | DQY302 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | binding site for residue DQY A 302 |
| Chain | Residue |
| A | HIS125 |
| A | GLU129 |
| A | TYR131 |
| A | FE301 |
| A | TYR92 |
| A | TYR110 |
| A | TYR120 |
| A | HIS123 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue BR A 303 |
| Chain | Residue |
| A | GLY53 |
| A | GLY136 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 304 |
| Chain | Residue |
| A | ARG38 |
| A | ARG75 |
| A | HOH467 |
| A | HOH508 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 305 |
| Chain | Residue |
| A | TRP26 |
| A | GOL307 |
| A | HOH468 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 306 |
| Chain | Residue |
| A | TYR113 |
| A | HOH510 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue GOL A 307 |
| Chain | Residue |
| A | GLU4 |
| A | LEU7 |
| A | PHE102 |
| A | CL305 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue FE B 301 |
| Chain | Residue |
| B | HIS125 |
| B | GLU129 |
| B | TYR131 |
| B | HIS163 |
| B | DQY302 |
| site_id | AC9 |
| Number of Residues | 8 |
| Details | binding site for residue DQY B 302 |
| Chain | Residue |
| B | TYR92 |
| B | TYR110 |
| B | TYR120 |
| B | HIS123 |
| B | HIS125 |
| B | GLU129 |
| B | TYR131 |
| B | FE301 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue BR B 303 |
| Chain | Residue |
| B | GLY53 |
| B | GLY136 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue CL B 304 |
| Chain | Residue |
| B | TYR113 |
| B | HOH447 |
| B | HOH494 |
| site_id | AD3 |
| Number of Residues | 3 |
| Details | binding site for residue CL B 305 |
| Chain | Residue |
| B | ARG38 |
| B | ARG75 |
| B | HOH480 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue CL B 306 |
| Chain | Residue |
| B | TRP26 |
| B | LEU30 |
| B | HOH483 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"24395783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LA2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4LA3","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"24395783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LA2","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
