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5JRQ

BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-6-VEM

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0004672molecular_functionprotein kinase activity
B0005524molecular_functionATP binding
B0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue 6N9 A 801
ChainResidue
AILE463
ACYS532
ASER535
APHE583
AGLY593
AASP594
APHE595
AGLY596
ADMS802
AHOH928
AVAL471
AALA481
ALYS483
ALEU514
AILE527
ATHR529
AGLN530
ATRP531

site_idAC2
Number of Residues5
Detailsbinding site for residue DMS A 802
ChainResidue
AGLY466
AASN580
A6N9801
AHOH928
AHOH988

site_idAC3
Number of Residues4
Detailsbinding site for residue GOL A 803
ChainResidue
AGLN530
AASP587
ALYS591
AHOH911

site_idAC4
Number of Residues6
Detailsbinding site for residue TMA A 804
ChainResidue
ATRP450
AARG506
ATHR508
AARG509
ALEU515
APHE516

site_idAC5
Number of Residues16
Detailsbinding site for residue 6N9 B 801
ChainResidue
BILE463
BVAL471
BALA481
BLYS483
BLEU514
BTHR529
BGLN530
BTRP531
BCYS532
BSER535
BPHE583
BGLY593
BASP594
BPHE595
BGLY596
BHOH917

site_idAC6
Number of Residues2
Detailsbinding site for residue DMS B 802
ChainResidue
BALA712
BGLU716

site_idAC7
Number of Residues6
Detailsbinding site for residue TMA B 803
ChainResidue
BTRP450
BARG506
BTHR508
BARG509
BLEU515
BPHE516

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues21
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. IGSGSFGTVYkGkwhgd.............VAVK
ChainResidueDetails
AILE463-LYS483

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IiHrDLKsnNIFL
ChainResidueDetails
AILE572-LEU584

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Omega-N-methylarginine; by PRMT5","evidences":[{"source":"PubMed","id":"21917714","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"23907581","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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