Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JOW

Bacteroides ovatus Xyloglucan PUL GH43A

Functional Information from GO Data
ChainGOidnamespacecontents
A0000272biological_processpolysaccharide catabolic process
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005975biological_processcarbohydrate metabolic process
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0042597cellular_componentperiplasmic space
A0046556molecular_functionalpha-L-arabinofuranosidase activity
A0085030biological_processsymbiotic process benefiting host
A2000899biological_processxyloglucan catabolic process
B0000272biological_processpolysaccharide catabolic process
B0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
B0005975biological_processcarbohydrate metabolic process
B0016787molecular_functionhydrolase activity
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0042597cellular_componentperiplasmic space
B0046556molecular_functionalpha-L-arabinofuranosidase activity
B0085030biological_processsymbiotic process benefiting host
B2000899biological_processxyloglucan catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue TRS A 601
ChainResidue
AASP34
AEDO603
AHOH817
AHOH824
APHE51
APHE93
AALA94
AILE139
AASP140
AGLU189
AARG283
APHE491

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 602
ChainResidue
ALEU162
AGLU164
ASER174
ASER175
ALYS177

site_idAC3
Number of Residues6
Detailsbinding site for residue EDO A 603
ChainResidue
AGLU189
AGLY208
ATHR209
AGLU210
ATRS601
AHOH724

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 604
ChainResidue
AGLU146
AASP147
ALYS149
ATYR200
AHOH854

site_idAC5
Number of Residues6
Detailsbinding site for residue EDO A 605
ChainResidue
AVAL290
AARG291
AHOH774
AHOH795
AHOH845
AHOH1041

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO A 606
ChainResidue
AASP295
AHOH702
AHOH716
AHOH921

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 607
ChainResidue
AASN301
AASN303
AHOH736
AHOH777

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 608
ChainResidue
AVAL132
ATRP133
ATHR169
AHOH752

site_idAC9
Number of Residues6
Detailsbinding site for residue EDO A 609
ChainResidue
AARG98
ALEU143
AHOH759
AHOH788
AHOH886
AHOH892

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO A 610
ChainResidue
AARG178
AILE179
AASP224
AGLY225
APRO226
AHOH704

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 611
ChainResidue
AGLU210
ATHR485
AGLY490
APHE491
AHOH707

site_idAD3
Number of Residues12
Detailsbinding site for residue TRS B 601
ChainResidue
BASP34
BPHE51
BPHE93
BALA94
BILE139
BASP140
BGLU189
BARG283
BPHE491
BEDO609
BHOH792
BHOH813

site_idAD4
Number of Residues7
Detailsbinding site for residue EDO B 602
ChainResidue
BGLU69
BGLN70
BLYS321
BGLU337
BHOH703
BHOH730
BHOH1140

site_idAD5
Number of Residues8
Detailsbinding site for residue EDO B 603
ChainResidue
BILE71
BGLY72
BASN73
BPRO124
BARG125
BSER126
BHOH877
BHOH1063

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO B 604
ChainResidue
BASN87
BSER88
BGLU408
BHOH729
BHOH757

site_idAD7
Number of Residues6
Detailsbinding site for residue EDO B 605
ChainResidue
BHOH899
BHOH968
BARG98
BLEU143
BHOH727
BHOH739

site_idAD8
Number of Residues4
Detailsbinding site for residue EDO B 606
ChainResidue
BGLU146
BASP147
BTYR200
BHOH920

site_idAD9
Number of Residues6
Detailsbinding site for residue EDO B 607
ChainResidue
BLEU162
BGLU164
BSER174
BSER175
BLYS177
BHOH793

site_idAE1
Number of Residues3
Detailsbinding site for residue EDO B 608
ChainResidue
BASP166
BMET168
BHOH819

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO B 609
ChainResidue
BGLU189
BGLY208
BTHR209
BGLU210
BTRS601

site_idAE3
Number of Residues7
Detailsbinding site for residue EDO B 610
ChainResidue
BVAL290
BARG291
BHOH798
BHOH807
BHOH816
BHOH961
BHOH1143

site_idAE4
Number of Residues4
Detailsbinding site for residue EDO B 611
ChainResidue
BLYS309
BASP311
BHOH770
BHOH831

site_idAE5
Number of Residues7
Detailsbinding site for residue EDO B 612
ChainResidue
BVAL390
BVAL391
BLEU392
BVAL417
BARG425
BHOH721
BHOH986

site_idAE6
Number of Residues4
Detailsbinding site for residue EDO B 613
ChainResidue
BSER426
BGLU442
BSER444
BHOH747

site_idAE7
Number of Residues4
Detailsbinding site for residue EDO B 614
ChainResidue
BLYS456
BTYR472
BASP474
BHOH873

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"27466444","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"27466444","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Important for catalytic activity, responsible for pKa modulation of the active site Glu and correct orientation of both the proton donor and substrate","evidences":[{"source":"PubMed","id":"27466444","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon