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5JLW

AntpHD with 15bp DNA duplex R-monothioated at Cytidine-8

Functional Information from GO Data
ChainGOidnamespacecontents
A0000981molecular_functionDNA-binding transcription factor activity, RNA polymerase II-specific
A0003677molecular_functionDNA binding
A0006355biological_processregulation of DNA-templated transcription
D0000981molecular_functionDNA-binding transcription factor activity, RNA polymerase II-specific
D0003677molecular_functionDNA binding
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NI A 101
ChainResidue
AHIS21
AHOH206
DHIS21
DASN60
DHOH114

site_idAC2
Number of Residues2
Detailsbinding site for residue NI B 101
ChainResidue
BDG1
CHOH122

site_idAC3
Number of Residues2
Detailsbinding site for residue NI B 102
ChainResidue
BDG12
BHOH207

site_idAC4
Number of Residues3
Detailsbinding site for residue NI B 103
ChainResidue
BDA3
BDA4
CDT13

site_idAC5
Number of Residues3
Detailsbinding site for residue NI E 101
ChainResidue
EDG2
EHOH205
EHOH218

site_idAC6
Number of Residues1
Detailsbinding site for residue NI E 102
ChainResidue
EDG13

site_idAC7
Number of Residues2
Detailsbinding site for residue MPD F 101
ChainResidue
FDT13
FMPD102

site_idAC8
Number of Residues3
Detailsbinding site for residue MPD F 102
ChainResidue
FDT13
FMPD101
FMPD103

site_idAC9
Number of Residues2
Detailsbinding site for residue MPD F 103
ChainResidue
FDT14
FMPD102

site_idAD1
Number of Residues8
Detailsbinding site for Di-nucleotide DC E 7 and C7R E 8
ChainResidue
DTYR25
DGLN50
DARG53
DMET54
EDG6
EDA9
FDG9
FDG10

site_idAD2
Number of Residues7
Detailsbinding site for Di-nucleotide C7R E 8 and DA E 9
ChainResidue
DMET54
EDC7
EDT10
FDA7
FDT8
FDG9
FDG10

Functional Information from PROSITE/UniProt
site_idPS00027
Number of Residues24
DetailsHOMEOBOX_1 'Homeobox' domain signature. IAhaLsLTerQIKIWFqNrrmkwK
ChainResidueDetails
AILE34-LYS57

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues118
DetailsDNA_BIND: Homeobox => ECO:0000255|PROSITE-ProRule:PRU00108
ChainResidueDetails
AARG1-ASN60
DARG1-ASN60

223790

PDB entries from 2024-08-14

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