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5JJV

Crystal structure of XerH site-specific recombinase bound to palindromic difH substrate: post-cleavage complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0005737cellular_componentcytoplasm
A0006310biological_processDNA recombination
A0007059biological_processchromosome segregation
A0009037molecular_functiontyrosine-based site-specific recombinase activity
A0015074biological_processDNA integration
A0051301biological_processcell division
B0003677molecular_functionDNA binding
B0005737cellular_componentcytoplasm
B0006310biological_processDNA recombination
B0007059biological_processchromosome segregation
B0009037molecular_functiontyrosine-based site-specific recombinase activity
B0015074biological_processDNA integration
B0051301biological_processcell division
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue GOL A 401
ChainResidue
AGLU58
BASP10
BGLU13

site_idAC2
Number of Residues4
Detailsbinding site for residue GOL A 402
ChainResidue
AGLU304
ALYS305
FDC23
FDA24

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL A 403
ChainResidue
AGLN278
ALEU266
ATYR267

site_idAC4
Number of Residues2
Detailsbinding site for residue GOL A 404
ChainResidue
AHIS324
BHIS324

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL A 405
ChainResidue
ALYS102
AASP145
ALYS149
ATYR151

site_idAC6
Number of Residues4
Detailsbinding site for residue CL A 406
ChainResidue
AALA336
ASER337
ATHR340
EDC13

site_idAC7
Number of Residues4
Detailsbinding site for residue GOL B 401
ChainResidue
AGLY118
BASN32
BVAL35
BGLN38

site_idAC8
Number of Residues3
Detailsbinding site for residue GOL B 402
ChainResidue
BGLU304
BLYS305
DDA24

site_idAC9
Number of Residues2
Detailsbinding site for residue GOL B 403
ChainResidue
BGLU6
BLEU8

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL B 404
ChainResidue
AARG342
BHIS324
BLEU326
BILE327
BHOH508

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
ChainResidueDetails
AARG213
ALYS239
AHIS309
AARG312
AHIS335
BARG213
BLYS239
BHIS309
BARG312
BHIS335

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: O-(3'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01246
ChainResidueDetails
ATYR344
BTYR344

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PDB entries from 2024-06-12

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