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5JF8

Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor RAS358 (21)

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue PN3 A 301
ChainResidue
AGLY72
AHIS178
AZN304
AHOH402
AHOH457
AHOH544
AHOH617
AGLN77
AGLU129
AGLY130
AOCS131
ALEU132
ATYR167
AHIS174
AGLU175

site_idAC2
Number of Residues8
Detailsbinding site for residue ACT A 302
ChainResidue
AHIS145
AGLU158
AASP177
AARG187
AZN308
AHOH469
AHOH492
AHOH565

site_idAC3
Number of Residues8
Detailsbinding site for residue IMD A 303
ChainResidue
AGLU32
AARG147
AVAL148
ALYS163
ALEU164
AZN312
AHOH531
AHOH613

site_idAC4
Number of Residues5
Detailsbinding site for residue ZN A 304
ChainResidue
AGLN77
AOCS131
AHIS174
AHIS178
APN3301

site_idAC5
Number of Residues3
Detailsbinding site for residue ZN A 305
ChainResidue
AHIS55
AGLU198
AHOH515

site_idAC6
Number of Residues7
Detailsbinding site for residue ZN A 306
ChainResidue
AHIS118
AHOH406
AHOH545
AHOH591
AHOH592
AHOH596
AHOH615

site_idAC7
Number of Residues5
Detailsbinding site for residue ZN A 307
ChainResidue
AASP94
AGLU190
AHOH433
AHOH463
AHOH573

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN A 308
ChainResidue
AHIS145
AGLU158
AACT302
AHOH585

site_idAC9
Number of Residues2
Detailsbinding site for residue ZN A 309
ChainResidue
AHIS12
AASP18

site_idAD1
Number of Residues3
Detailsbinding site for residue ZN A 310
ChainResidue
AGLU43
AGLU47
AHOH559

site_idAD2
Number of Residues5
Detailsbinding site for residue ZN A 311
ChainResidue
AGLU102
AGLU151
ALYS159
AHOH524
AHOH609

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN A 312
ChainResidue
AGLU32
AIMD303
AHOH589
AHOH598

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AGLU175

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AOCS131
AHIS174
AHIS178

218853

PDB entries from 2024-04-24

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