Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JF7

Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor SMP289

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue 6JU A 301
ChainResidue
AGLY72
AZN304
AGLN77
AGLU129
AGLY130
AOCS131
ALEU132
AHIS174
AGLU175
AHIS178

site_idAC2
Number of Residues7
Detailsbinding site for residue ACT A 302
ChainResidue
AHIS145
AGLU158
AASP177
AARG187
AZN308
AHOH415
AHOH487

site_idAC3
Number of Residues9
Detailsbinding site for residue IMD A 303
ChainResidue
AGLU32
AARG147
AVAL148
ALYS163
ALEU164
AZN312
AHOH405
AHOH555
AHOH608

site_idAC4
Number of Residues5
Detailsbinding site for residue ZN A 304
ChainResidue
AGLN77
AOCS131
AHIS174
AHIS178
A6JU301

site_idAC5
Number of Residues5
Detailsbinding site for residue ZN A 305
ChainResidue
AHIS55
AGLU198
AHOH500
AHOH511
AHOH567

site_idAC6
Number of Residues7
Detailsbinding site for residue ZN A 306
ChainResidue
AHIS118
AASP154
AHOH404
AHOH554
AHOH564
AHOH572
AHOH577

site_idAC7
Number of Residues5
Detailsbinding site for residue ZN A 307
ChainResidue
AASP94
AGLU190
AHOH416
AHOH422
AHOH566

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN A 308
ChainResidue
AHIS145
AGLU158
AACT302
AHOH561

site_idAC9
Number of Residues6
Detailsbinding site for residue ZN A 309
ChainResidue
AHIS12
AASP18
AHOH414
AHOH418
AHOH539
AHOH574

site_idAD1
Number of Residues4
Detailsbinding site for residue ZN A 310
ChainResidue
AGLU43
AGLU47
AHOH507
AHOH568

site_idAD2
Number of Residues4
Detailsbinding site for residue ZN A 311
ChainResidue
AGLU102
AGLU151
AHOH556
AHOH583

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN A 312
ChainResidue
AGLU32
AIMD303
AHOH405
AHOH602

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AGLU175

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AOCS131
AHIS174
AHIS178

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon