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5JDF

Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 1mM Ca2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0005262molecular_functioncalcium channel activity
A0005886cellular_componentplasma membrane
A0006874biological_processintracellular calcium ion homeostasis
A0008273molecular_functioncalcium, potassium:sodium antiporter activity
A0016020cellular_componentmembrane
A0035725biological_processsodium ion transmembrane transport
A0055085biological_processtransmembrane transport
A0070588biological_processcalcium ion transmembrane transport
A0071805biological_processpotassium ion transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CA A 401
ChainResidue
AILE118
AASP121
AGLY122
AASP127
AOLC407
AHOH505

site_idAC2
Number of Residues7
Detailsbinding site for residue CA A 402
ChainResidue
ASER77
ATHR209
AGLU213
AASP240
ATHR50
ASER51
AGLU54

site_idAC3
Number of Residues7
Detailsbinding site for residue OLC A 403
ChainResidue
ASER37
AASN38
APHE39
AASN224
ALEU225
AGLY226
AGLY227

site_idAC4
Number of Residues4
Detailsbinding site for residue OLC A 404
ChainResidue
AALA116
AILE120
AASN258
AVAL259

site_idAC5
Number of Residues5
Detailsbinding site for residue OLC A 405
ChainResidue
APRO53
ALEU176
AALA179
AGLU180
AGLY208

site_idAC6
Number of Residues6
Detailsbinding site for residue OLC A 407
ChainResidue
APHE114
AVAL117
AILE118
AASP121
AASP127
ACA401

site_idAC7
Number of Residues3
Detailsbinding site for residue MYS A 409
ChainResidue
AARG140
AVAL143
AARG300

site_idAC8
Number of Residues5
Detailsbinding site for residue MYS A 411
ChainResidue
AILE91
ATRP125
ALEU250
AILE286
AILE293

site_idAC9
Number of Residues2
Detailsbinding site for residue MYS A 412
ChainResidue
AVAL107
APHE114

site_idAD1
Number of Residues1
Detailsbinding site for residue MYS A 413
ChainResidue
ASER298

site_idAD2
Number of Residues4
Detailsbinding site for residue 1PE A 414
ChainResidue
ATYR17
ASER20
AALA219
ALYS222

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues180
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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