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5JCK

Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003729molecular_functionmRNA binding
A0005737cellular_componentcytoplasm
A0005782cellular_componentperoxisomal matrix
A0016491molecular_functionoxidoreductase activity
A0016651molecular_functionoxidoreductase activity, acting on NAD(P)H
A0016656molecular_functionmonodehydroascorbate reductase (NADH) activity
A0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues36
Detailsbinding site for residue FAD A 500
ChainResidue
AGLY13
APRO49
ASER52
ALYS53
ATHR94
AGLU95
AILE96
AALA122
ATHR123
AGLY124
AARG147
AGLY14
AGLU148
ALEU265
AGLY297
AASP298
AGLU314
AHIS315
AVAL316
AALA319
ATYR349
ANAD501
AGLY15
AHOH621
AHOH686
AHOH708
AHOH712
AHOH726
AHOH730
AHOH826
AVAL16
AALA17
ASER39
ALYS40
AGLU41
AARG48

site_idAC2
Number of Residues30
Detailsbinding site for residue NAD A 501
ChainResidue
APHE133
AVAL170
AGLY171
AGLY172
AGLY173
ATYR174
AILE175
AGLU178
APHE194
APRO195
AGLU196
APRO201
AARG202
AGLY259
AVAL260
AGLY261
AGLU314
AHIS315
ATYR349
AFAD500
AHOH617
AHOH665
AHOH691
AHOH727
AHOH730
AHOH731
AHOH732
AHOH788
AHOH847
AHOH878

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:27652777, ECO:0007744|PDB:5JCI
ChainResidueDetails
AGLY14
AGLU41
AARG48
ALYS53
AILE96
AARG147
AASP298
AVAL316

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:27652777, ECO:0007744|PDB:5JCK
ChainResidueDetails
AGLY172
AGLU196

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:27652777, ECO:0007744|PDB:5JCL
ChainResidueDetails
ATYR174
AARG202
AGLY261
AGLU314
ATYR349

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:27652777, ECO:0007744|PDB:5JCN
ChainResidueDetails
AARG320
AARG351

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PDB entries from 2024-10-16

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