5JAB
Structure of the biliverdin reductase Rv2074 from Mycobacterium tuberculosis in complex with F420
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005576 | cellular_component | extracellular region |
A | 0009274 | cellular_component | peptidoglycan-based cell wall |
A | 0009986 | cellular_component | cell surface |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0055114 | biological_process | obsolete oxidation-reduction process |
A | 0070967 | molecular_function | coenzyme F420 binding |
B | 0005515 | molecular_function | protein binding |
B | 0005576 | cellular_component | extracellular region |
B | 0009274 | cellular_component | peptidoglycan-based cell wall |
B | 0009986 | cellular_component | cell surface |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0055114 | biological_process | obsolete oxidation-reduction process |
B | 0070967 | molecular_function | coenzyme F420 binding |
C | 0005515 | molecular_function | protein binding |
C | 0005576 | cellular_component | extracellular region |
C | 0009274 | cellular_component | peptidoglycan-based cell wall |
C | 0009986 | cellular_component | cell surface |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
C | 0042803 | molecular_function | protein homodimerization activity |
C | 0055114 | biological_process | obsolete oxidation-reduction process |
C | 0070967 | molecular_function | coenzyme F420 binding |
D | 0005515 | molecular_function | protein binding |
D | 0005576 | cellular_component | extracellular region |
D | 0009274 | cellular_component | peptidoglycan-based cell wall |
D | 0009986 | cellular_component | cell surface |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
D | 0042803 | molecular_function | protein homodimerization activity |
D | 0055114 | biological_process | obsolete oxidation-reduction process |
D | 0070967 | molecular_function | coenzyme F420 binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 28 |
Details | binding site for residue 6J4 A 201 |
Chain | Residue |
A | HIS36 |
A | LYS61 |
A | ARG67 |
A | HOH327 |
A | HOH330 |
A | HOH332 |
A | HOH342 |
A | HOH351 |
A | HOH358 |
A | HOH368 |
A | HOH391 |
A | VAL38 |
A | HOH406 |
A | HOH408 |
A | HOH415 |
A | HOH417 |
B | ARG9 |
B | GLY78 |
B | ALA79 |
B | TRP81 |
B | ARG126 |
A | ALA39 |
A | VAL40 |
A | GLY41 |
A | ILE54 |
A | THR55 |
A | GLY58 |
A | GLN60 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue CL A 202 |
Chain | Residue |
A | THR55 |
A | ASN114 |
A | ARG117 |
site_id | AC3 |
Number of Residues | 26 |
Details | binding site for residue 6J4 B 201 |
Chain | Residue |
A | MET1 |
A | GLY78 |
A | ALA79 |
A | TRP81 |
B | HIS36 |
B | VAL38 |
B | ALA39 |
B | VAL40 |
B | GLY41 |
B | ILE54 |
B | THR55 |
B | GLY58 |
B | GLN60 |
B | LYS61 |
B | ARG67 |
B | HOH306 |
B | HOH310 |
B | HOH317 |
B | HOH322 |
B | HOH324 |
B | HOH329 |
B | HOH330 |
B | HOH362 |
B | HOH364 |
B | HOH383 |
B | HOH392 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue CL B 202 |
Chain | Residue |
B | THR55 |
B | ASN114 |
B | ARG117 |
B | HOH352 |
site_id | AC5 |
Number of Residues | 29 |
Details | binding site for residue 6J4 C 201 |
Chain | Residue |
C | HIS36 |
C | VAL38 |
C | ALA39 |
C | VAL40 |
C | GLY41 |
C | ILE54 |
C | THR55 |
C | GLY58 |
C | SER59 |
C | GLN60 |
C | LYS61 |
C | ARG67 |
C | HOH326 |
C | HOH330 |
C | HOH343 |
C | HOH349 |
C | HOH351 |
C | HOH360 |
C | HOH363 |
C | HOH366 |
C | HOH370 |
C | HOH378 |
C | HOH381 |
C | HOH401 |
D | GLY78 |
D | ALA79 |
D | TRP81 |
D | ARG126 |
D | LEU128 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue CL C 202 |
Chain | Residue |
C | THR55 |
C | ASN114 |
C | ARG117 |
site_id | AC7 |
Number of Residues | 29 |
Details | binding site for residue 6J4 D 201 |
Chain | Residue |
D | VAL38 |
D | ALA39 |
D | VAL40 |
D | GLY41 |
D | ILE54 |
D | THR55 |
D | GLY58 |
D | GLN60 |
D | LYS61 |
D | ARG67 |
D | HOH305 |
D | HOH313 |
D | HOH319 |
D | HOH320 |
D | HOH322 |
D | HOH328 |
D | HOH330 |
D | HOH354 |
D | HOH365 |
D | HOH366 |
D | HOH370 |
D | HOH379 |
D | HOH388 |
C | GLY78 |
C | ALA79 |
C | TRP81 |
C | ARG126 |
C | LEU128 |
D | HIS36 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue CL D 202 |
Chain | Residue |
D | THR55 |
D | ASN114 |
D | ARG117 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 16 |
Details | BINDING: in other chain => ECO:0000269|PubMed:27364382 |
Chain | Residue | Details |
A | HIS36 | |
C | ILE54 | |
C | GLN60 | |
C | ARG67 | |
D | HIS36 | |
D | ILE54 | |
D | GLN60 | |
D | ARG67 | |
A | ILE54 | |
A | GLN60 | |
A | ARG67 | |
B | HIS36 | |
B | ILE54 | |
B | GLN60 | |
B | ARG67 | |
C | HIS36 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:27364382 |
Chain | Residue | Details |
A | GLY78 | |
B | GLY78 | |
C | GLY78 | |
D | GLY78 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | CROSSLNK: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup) => ECO:0000269|PubMed:20066036 |
Chain | Residue | Details |
A | LYS47 | |
B | LYS47 | |
C | LYS47 | |
D | LYS47 |