5IZD
Wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| A | 0005829 | cellular_component | cytosol |
| A | 0006096 | biological_process | glycolytic process |
| A | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| A | 0009450 | biological_process | GABA catabolic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0042803 | molecular_function | protein homodimerization activity |
| A | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| A | 0051289 | biological_process | protein homotetramerization |
| B | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| B | 0005829 | cellular_component | cytosol |
| B | 0006096 | biological_process | glycolytic process |
| B | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| B | 0009450 | biological_process | GABA catabolic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0042803 | molecular_function | protein homodimerization activity |
| B | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| B | 0051289 | biological_process | protein homotetramerization |
| C | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| C | 0005829 | cellular_component | cytosol |
| C | 0006096 | biological_process | glycolytic process |
| C | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| C | 0009450 | biological_process | GABA catabolic process |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0042803 | molecular_function | protein homodimerization activity |
| C | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| C | 0051289 | biological_process | protein homotetramerization |
| D | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| D | 0005829 | cellular_component | cytosol |
| D | 0006096 | biological_process | glycolytic process |
| D | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| D | 0009450 | biological_process | GABA catabolic process |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0042803 | molecular_function | protein homodimerization activity |
| D | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| D | 0051289 | biological_process | protein homotetramerization |
| E | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| E | 0005829 | cellular_component | cytosol |
| E | 0006096 | biological_process | glycolytic process |
| E | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| E | 0009450 | biological_process | GABA catabolic process |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0042803 | molecular_function | protein homodimerization activity |
| E | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| E | 0051289 | biological_process | protein homotetramerization |
| F | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| F | 0005829 | cellular_component | cytosol |
| F | 0006096 | biological_process | glycolytic process |
| F | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| F | 0009450 | biological_process | GABA catabolic process |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0042803 | molecular_function | protein homodimerization activity |
| F | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| F | 0051289 | biological_process | protein homotetramerization |
| G | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| G | 0005829 | cellular_component | cytosol |
| G | 0006096 | biological_process | glycolytic process |
| G | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| G | 0009450 | biological_process | GABA catabolic process |
| G | 0016491 | molecular_function | oxidoreductase activity |
| G | 0042803 | molecular_function | protein homodimerization activity |
| G | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| G | 0051289 | biological_process | protein homotetramerization |
| H | 0004777 | molecular_function | succinate-semialdehyde dehydrogenase (NAD+) activity |
| H | 0005829 | cellular_component | cytosol |
| H | 0006096 | biological_process | glycolytic process |
| H | 0009255 | biological_process | Entner-Doudoroff pathway through 6-phosphogluconate |
| H | 0009450 | biological_process | GABA catabolic process |
| H | 0016491 | molecular_function | oxidoreductase activity |
| H | 0042803 | molecular_function | protein homodimerization activity |
| H | 0043796 | molecular_function | glyceraldehyde dehydrogenase (NADP+) activity |
| H | 0051289 | biological_process | protein homotetramerization |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue NAP A 601 |
| Chain | Residue |
| A | LEU145 |
| A | GLY205 |
| A | GLY209 |
| A | ASP210 |
| A | THR224 |
| A | GLY225 |
| A | SER226 |
| A | THR229 |
| A | HOH714 |
| A | HOH737 |
| A | HOH793 |
| A | THR146 |
| A | TRP148 |
| A | LYS172 |
| A | PRO173 |
| A | SER174 |
| A | SER175 |
| A | GLY203 |
| A | ARG204 |
| site_id | AC2 |
| Number of Residues | 18 |
| Details | binding site for residue NAP B 601 |
| Chain | Residue |
| B | LEU145 |
| B | THR146 |
| B | PRO147 |
| B | TRP148 |
| B | LYS172 |
| B | PRO173 |
| B | SER174 |
| B | SER175 |
| B | GLY203 |
| B | GLY205 |
| B | GLY209 |
| B | ASP210 |
| B | MET223 |
| B | THR224 |
| B | GLY225 |
| B | SER226 |
| B | THR229 |
| B | HOH711 |
| site_id | AC3 |
| Number of Residues | 19 |
| Details | binding site for residue NAP C 601 |
| Chain | Residue |
| C | LEU145 |
| C | THR146 |
| C | TRP148 |
| C | LYS172 |
| C | PRO173 |
| C | SER174 |
| C | SER175 |
| C | GLY203 |
| C | ARG204 |
| C | GLY205 |
| C | GLY209 |
| C | ASP210 |
| C | SER226 |
| C | THR229 |
| C | ARG232 |
| C | HOH724 |
| C | HOH730 |
| C | HOH743 |
| C | HOH756 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | binding site for residue NAP D 601 |
| Chain | Residue |
| D | LEU145 |
| D | THR146 |
| D | TRP148 |
| D | LYS172 |
| D | PRO173 |
| D | SER174 |
| D | SER175 |
| D | GLY203 |
| D | GLY205 |
| D | GLY209 |
| D | ASP210 |
| D | MET223 |
| D | THR224 |
| D | GLY225 |
| D | SER226 |
| D | THR229 |
| D | ARG232 |
| site_id | AC5 |
| Number of Residues | 16 |
| Details | binding site for residue NAP G 601 |
| Chain | Residue |
| G | LEU145 |
| G | THR146 |
| G | TRP148 |
| G | LYS172 |
| G | PRO173 |
| G | SER174 |
| G | SER175 |
| G | GLY203 |
| G | GLY205 |
| G | GLY209 |
| G | ASP210 |
| G | MET223 |
| G | THR224 |
| G | GLY225 |
| G | SER226 |
| G | THR229 |
| site_id | AC6 |
| Number of Residues | 18 |
| Details | binding site for residue NAP H 601 |
| Chain | Residue |
| H | ASP210 |
| H | THR224 |
| H | GLY225 |
| H | SER226 |
| H | THR229 |
| H | ARG232 |
| H | HOH713 |
| H | HOH766 |
| H | LEU145 |
| H | THR146 |
| H | TRP148 |
| H | LYS172 |
| H | PRO173 |
| H | SER174 |
| H | SER175 |
| H | GLY203 |
| H | GLY205 |
| H | GLY209 |
Functional Information from PROSITE/UniProt
| site_id | PS00070 |
| Number of Residues | 12 |
| Details | ALDEHYDE_DEHYDR_CYS Aldehyde dehydrogenases cysteine active site. YwNAGQSCIAAE |
| Chain | Residue | Details |
| A | TYR274-GLU285 |
| site_id | PS00687 |
| Number of Residues | 8 |
| Details | ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. LELGGKAP |
| Chain | Residue | Details |
| A | LEU246-PRO253 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 176 |
| Details | Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10007","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Active site: {"description":"Proton donor","evidences":[{"source":"UniProtKB","id":"P28037","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P28037","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"O57693","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 32 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q59931","evidenceCode":"ECO:0000250"},{"source":"UniProtKB","id":"Q84DC3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 48 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q84DC3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 184 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q59931","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P28037","evidenceCode":"ECO:0000250"},{"source":"UniProtKB","id":"Q59931","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 8 |
| Details | Site: {"description":"Transition state stabilizer","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






