5ITP
Structure of the periplasmic binding protein NocT from A.tumefaciens in complex with octopine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| A | 0016020 | cellular_component | membrane |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0034220 | biological_process | monoatomic ion transmembrane transport |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0071705 | biological_process | nitrogen compound transport |
| B | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| B | 0016020 | cellular_component | membrane |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0034220 | biological_process | monoatomic ion transmembrane transport |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0071705 | biological_process | nitrogen compound transport |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue 6DB A 301 |
| Chain | Residue |
| A | GLU36 |
| A | GLN165 |
| A | THR168 |
| A | SER169 |
| A | HIS170 |
| A | SER207 |
| A | VAL239 |
| A | HOH416 |
| A | TYR39 |
| A | TYR42 |
| A | TRP77 |
| A | ALA94 |
| A | ALA95 |
| A | GLY97 |
| A | ARG102 |
| A | MET117 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 302 |
| Chain | Residue |
| A | LYS104 |
| A | THR143 |
| A | PRO144 |
| A | GLU145 |
| A | HOH409 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 303 |
| Chain | Residue |
| A | LYS104 |
| A | LYS175 |
| A | HOH459 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 304 |
| Chain | Residue |
| A | ILE81 |
| A | PRO144 |
| A | HOH409 |
| A | HOH449 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 305 |
| Chain | Residue |
| A | PRO138 |
| A | ASN141 |
| A | THR143 |
| A | GLN146 |
| A | HOH512 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 306 |
| Chain | Residue |
| A | ALA133 |
| A | ILE134 |
| A | GLU135 |
| A | ASN136 |
| A | EDO307 |
| A | HOH451 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 307 |
| Chain | Residue |
| A | TYR186 |
| A | ASP187 |
| A | ASN191 |
| A | EDO306 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 308 |
| Chain | Residue |
| A | ALA86 |
| A | GLY87 |
| A | HOH455 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | binding site for residue PEG A 309 |
| Chain | Residue |
| A | LEU114 |
| A | THR115 |
| A | THR231 |
| A | GLY238 |
| A | HOH433 |
| A | HOH474 |
| A | HOH486 |
| site_id | AD1 |
| Number of Residues | 16 |
| Details | binding site for residue 6DB B 301 |
| Chain | Residue |
| B | GLU36 |
| B | TYR39 |
| B | TYR42 |
| B | TRP77 |
| B | ALA94 |
| B | ALA95 |
| B | GLY97 |
| B | ARG102 |
| B | MET117 |
| B | GLN165 |
| B | THR168 |
| B | SER169 |
| B | HIS170 |
| B | SER207 |
| B | VAL239 |
| B | HOH415 |
Functional Information from PROSITE/UniProt
| site_id | PS01039 |
| Number of Residues | 14 |
| Details | SBP_BACTERIAL_3 Bacterial extracellular solute-binding proteins, family 3 signature. GFDIDLGNdLCKRM |
| Chain | Residue | Details |
| A | GLY53-MET66 |
