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5IN9

Crystal structure of Grp94 bound to methyl 3-chloro-2-(2-(1-((5-chlorofuran-2-yl)methyl)-1H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, an inhibitor based on the BnIm and Radamide scaffolds.

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0006457biological_processprotein folding
A0016887molecular_functionATP hydrolysis activity
A0051082molecular_functionunfolded protein binding
A0140662molecular_functionATP-dependent protein folding chaperone
B0005524molecular_functionATP binding
B0006457biological_processprotein folding
B0016887molecular_functionATP hydrolysis activity
B0051082molecular_functionunfolded protein binding
B0140662molecular_functionATP-dependent protein folding chaperone
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue PGE A 401
ChainResidue
AASN83
ALYS87
ASER227
BLYS87
BSER227

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 402
ChainResidue
AGLU229
BARG84
ALYS75
AGLU224
ASER225
AASP226

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL A 403
ChainResidue
AASP110
AASP113
ALYS114

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 404
ChainResidue
AGLU131
ALEU132
ATHR133
APRO278

site_idAC5
Number of Residues3
Detailsbinding site for residue GOL A 405
ChainResidue
ALYS137
ATRP282
ATRP333

site_idAC6
Number of Residues4
Detailsbinding site for residue GOL A 406
ChainResidue
ATHR212
AARG237
ATHR248
AHOH504

site_idAC7
Number of Residues3
Detailsbinding site for residue GOL A 407
ChainResidue
ALYS137
AHIS146
ATHR148

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 408
ChainResidue
AALA77
AASN228
AGLU229
BPHE78
BGLN79
BALA80

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL A 409
ChainResidue
AILE275
AASN276
APHE277
APRO278
AASN337

site_idAD1
Number of Residues14
Detailsbinding site for residue 6C0 A 410
ChainResidue
ALEU104
AASN107
AALA111
AASP149
AMET154
AASN162
AILE166
ALYS168
AGLY196
APHE199
ATHR245
AILE247
AHOH503
AHOH505

site_idAD2
Number of Residues7
Detailsbinding site for residue GOL B 401
ChainResidue
AARG84
BLYS75
BLYS208
BGLU224
BASP226
BGLU229
BSER231

site_idAD3
Number of Residues3
Detailsbinding site for residue GOL B 402
ChainResidue
BASP110
BASP113
BLYS114

site_idAD4
Number of Residues1
Detailsbinding site for residue GOL B 403
ChainResidue
BGOL404

site_idAD5
Number of Residues1
Detailsbinding site for residue GOL B 404
ChainResidue
BGOL403

site_idAD6
Number of Residues6
Detailsbinding site for residue GOL B 405
ChainResidue
BASP122
BALA125
BHIS215
BASN216
BASN217
BHOH506

site_idAD7
Number of Residues19
Detailsbinding site for residue 6C0 B 406
ChainResidue
BASN107
BALA111
BLYS114
BASP149
BVAL152
BGLY153
BMET154
BASN162
BLEU163
BLYS168
BGLY196
BVAL197
BPHE199
BTYR200
BTHR245
BILE247
BHOH501
BHOH502
BHOH509

Functional Information from PROSITE/UniProt
site_idPS00298
Number of Residues10
DetailsHSP90 Heat shock hsp90 proteins family signature. YkNKEIFLRE
ChainResidueDetails
ATYR94-GLU103

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15292259","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15951571","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17936703","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1TC0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TC6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YT0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1V","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15292259","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15951571","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17936703","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1TBW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TC0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TC6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YT0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1V","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15292259","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15951571","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17936703","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1TBW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TC0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TC6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O1V","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"UniProtKB","id":"P14625","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q66HD0","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

248636

PDB entries from 2026-02-04

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