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5IJW

Glutamate Racemase (MurI) from Mycobacterium smegmatis with bound D-glutamate, 1.8 Angstrom resolution, X-ray diffraction

Functional Information from GO Data
ChainGOidnamespacecontents
A0008360biological_processregulation of cell shape
A0008881molecular_functionglutamate racemase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016853molecular_functionisomerase activity
A0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
A0047661molecular_functionamino-acid racemase activity
A0071555biological_processcell wall organization
B0008360biological_processregulation of cell shape
B0008881molecular_functionglutamate racemase activity
B0009252biological_processpeptidoglycan biosynthetic process
B0016853molecular_functionisomerase activity
B0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
B0047661molecular_functionamino-acid racemase activity
B0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue DGL A 301
ChainResidue
AASP12
ACYS186
ATHR187
AHIS188
AHOH448
AHOH454
ASER13
APRO43
ATYR44
AGLY45
ACYS75
AASN76
ATHR77
ATHR120

site_idAC2
Number of Residues4
Detailsbinding site for residue IOD A 302
ChainResidue
AGLY45
AGLN121
APRO147
AHOH491

site_idAC3
Number of Residues2
Detailsbinding site for residue IOD A 303
ChainResidue
APRO261
BARG240

site_idAC4
Number of Residues2
Detailsbinding site for residue IOD A 304
ChainResidue
AALA250
AHOH657

site_idAC5
Number of Residues14
Detailsbinding site for residue DGL B 301
ChainResidue
BASP12
BSER13
BPRO43
BTYR44
BGLY45
BCYS75
BASN76
BTHR77
BTHR120
BCYS186
BTHR187
BHIS188
BHOH443
BHOH452

Functional Information from PROSITE/UniProt
site_idPS00923
Number of Residues9
DetailsASP_GLU_RACEMASE_1 Aspartate and glutamate racemases signature 1. VIaC.NTASS
ChainResidueDetails
AVAL72-SER80

site_idPS00924
Number of Residues11
DetailsASP_GLU_RACEMASE_2 Aspartate and glutamate racemases signature 2. LVlGCTHYPmL
ChainResidueDetails
ALEU182-LEU192

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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