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5I88

BRD4 in complex with Cpd4 ((E)-3-(6-(but-2-en-1-yl)-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl)-N,N-dimethylbenzamide)

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 202
ChainResidue
APGE201
AHOH325
AHOH396
AHOH411

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO A 203
ChainResidue
ALYS160
AHOH308
AILE100
AILE101
ALYS102
ATHR103
AASN135

site_idAC3
Number of Residues6
Detailsbinding site for residue DMS A 204
ChainResidue
APRO86
ATHR109
ALYS112
AHOH307
AHOH324
AHOH379

site_idAC4
Number of Residues14
Detailsbinding site for residue 69G A 205
ChainResidue
ASER51
ATRP81
APRO82
APHE83
AGLN85
AVAL87
ALEU92
AASN116
AASN140
AILE146
APGE201
AHOH312
AHOH316
AHOH340

site_idAC5
Number of Residues22
Detailsbinding site for residues PGE A 201 and GOL A 206
ChainResidue
ATHR43
ASER51
AASN52
APRO53
APRO53
AASN54
ALYS55
ALYS55
APRO56
ALYS57
ATRP81
ATYR98
ALYS99
AASN116
ATYR118
AEDO202
A69G205
AHOH315
AHOH322
AHOH322
AHOH343
AHOH370

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues60
DetailsBROMODOMAIN_1 Bromodomain signature. AwpFqqpvDavklnlpDYYkiIktpMdmgtIkkrlenny..Ywnaqeciqdfnt.MftNCyiY
ChainResidueDetails
AALA80-TYR139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues106
DetailsDomain: {"description":"Bromo 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00035","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsSite: {"description":"Acetylated histone binding","evidences":[{"source":"PubMed","id":"22464331","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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