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5I24

Crystal Structure of Agd31B, alpha-transglucosylase in Glycoside Hydrolase Family 31, in complex with Cyclophellitol Aziridine probe CF021

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005975biological_processcarbohydrate metabolic process
A0006491biological_processN-glycan processing
A0016757molecular_functionglycosyltransferase activity
A0030246molecular_functioncarbohydrate binding
A0033825molecular_functionoligosaccharide 4-alpha-D-glucosyltransferase activity
A0090599molecular_functionalpha-glucosidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue SO4 A 901
ChainResidue
AARG58
AARG231
AHOH1288

site_idAC2
Number of Residues3
Detailsbinding site for residue SO4 A 902
ChainResidue
AARG797
AHOH1379
AHOH1440

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 903
ChainResidue
AASP326
AHOH1173
AHOH1264
ATHR323
APRO324
ALEU325

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 904
ChainResidue
ATHR732
AASP733
AASN734
AGLN735

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 905
ChainResidue
AARG123
AGLY239
AASN240
ASER244
AASN248
AHOH1245

site_idAC6
Number of Residues6
Detailsbinding site for residue PG4 A 906
ChainResidue
ALEU566
AARG569
ATYR674
AGLU690
AEDO910
AHOH1011

site_idAC7
Number of Residues13
Detailsbinding site for residue 66U A 907
ChainResidue
APHE271
AASP299
AILE341
ATRP410
AASP412
AARG463
ATRP477
AASP480
APHE513
AHIS540
AHOH1016
AHOH1030
AHOH1031

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 908
ChainResidue
AGLN77
ALEU78
ASER229
AGLY230

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 909
ChainResidue
AARG176
AHIS178
AGLN187
AHOH1002

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 910
ChainResidue
APHE640
ATRP641
APG4906

site_idAD2
Number of Residues8
Detailsbinding site for residue TRS A 911
ChainResidue
AHIS731
ASER764
AGLN766
AARG798
ALYS817
AHOH1078
AHOH1195
AHOH1359

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:23132856
ChainResidueDetails
AASP412

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000250|UniProtKB:P31434
ChainResidueDetails
AGLU415

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:P31434
ChainResidueDetails
AASP480

site_idSWS_FT_FI4
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:23132856
ChainResidueDetails
AASP299
AGLU417
AARG463
AASP480
AHIS540

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PDB entries from 2024-06-26

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