5HZU
Crystal structure of Dronpa-Ni2+
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006091 | biological_process | generation of precursor metabolites and energy |
| A | 0008218 | biological_process | bioluminescence |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0006091 | biological_process | generation of precursor metabolites and energy |
| B | 0008218 | biological_process | bioluminescence |
| B | 0042802 | molecular_function | identical protein binding |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0006091 | biological_process | generation of precursor metabolites and energy |
| C | 0008218 | biological_process | bioluminescence |
| C | 0042802 | molecular_function | identical protein binding |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0006091 | biological_process | generation of precursor metabolites and energy |
| D | 0008218 | biological_process | bioluminescence |
| D | 0042802 | molecular_function | identical protein binding |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0006091 | biological_process | generation of precursor metabolites and energy |
| E | 0008218 | biological_process | bioluminescence |
| E | 0042802 | molecular_function | identical protein binding |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0006091 | biological_process | generation of precursor metabolites and energy |
| F | 0008218 | biological_process | bioluminescence |
| F | 0042802 | molecular_function | identical protein binding |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0006091 | biological_process | generation of precursor metabolites and energy |
| G | 0008218 | biological_process | bioluminescence |
| G | 0042802 | molecular_function | identical protein binding |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0006091 | biological_process | generation of precursor metabolites and energy |
| H | 0008218 | biological_process | bioluminescence |
| H | 0042802 | molecular_function | identical protein binding |
| H | 0046872 | molecular_function | metal ion binding |
| I | 0006091 | biological_process | generation of precursor metabolites and energy |
| I | 0008218 | biological_process | bioluminescence |
| I | 0042802 | molecular_function | identical protein binding |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0006091 | biological_process | generation of precursor metabolites and energy |
| J | 0008218 | biological_process | bioluminescence |
| J | 0042802 | molecular_function | identical protein binding |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0006091 | biological_process | generation of precursor metabolites and energy |
| K | 0008218 | biological_process | bioluminescence |
| K | 0042802 | molecular_function | identical protein binding |
| K | 0046872 | molecular_function | metal ion binding |
| L | 0006091 | biological_process | generation of precursor metabolites and energy |
| L | 0008218 | biological_process | bioluminescence |
| L | 0042802 | molecular_function | identical protein binding |
| L | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue NI A 301 |
| Chain | Residue |
| A | HIS194 |
| A | HIS212 |
| A | HOH501 |
| A | HOH534 |
| B | HOH404 |
| B | HOH408 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue NI A 302 |
| Chain | Residue |
| A | HOH541 |
| A | HOH543 |
| A | HOH547 |
| A | HIS200 |
| A | HOH473 |
| A | HOH540 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue NI B 301 |
| Chain | Residue |
| B | HIS194 |
| B | HIS212 |
| B | HOH453 |
| B | HOH504 |
| B | HOH529 |
| B | HOH530 |
| B | HOH552 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue NI B 302 |
| Chain | Residue |
| B | HIS200 |
| B | HOH449 |
| B | HOH501 |
| B | HOH524 |
| B | HOH540 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue NI C 301 |
| Chain | Residue |
| C | HIS194 |
| C | HIS212 |
| C | HOH518 |
| C | HOH535 |
| C | HOH540 |
| C | HOH543 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue NI C 302 |
| Chain | Residue |
| C | HIS200 |
| C | HOH414 |
| C | HOH495 |
| C | HOH541 |
| C | HOH550 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue NI D 301 |
| Chain | Residue |
| D | HIS200 |
| D | HOH434 |
| D | HOH528 |
| D | HOH529 |
| D | HOH532 |
| D | HOH541 |
| D | HOH555 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue NI D 302 |
| Chain | Residue |
| D | HIS194 |
| D | HIS212 |
| D | HOH504 |
| D | HOH506 |
| D | HOH508 |
| D | HOH530 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | binding site for residue NI E 301 |
| Chain | Residue |
| E | HIS194 |
| E | HIS212 |
| E | HOH506 |
| E | HOH519 |
| E | HOH533 |
| E | HOH541 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue NI E 302 |
| Chain | Residue |
| E | HIS200 |
| E | HOH494 |
| E | HOH512 |
| E | HOH532 |
| E | HOH542 |
| J | HOH526 |
| site_id | AD2 |
| Number of Residues | 6 |
| Details | binding site for residue NI F 301 |
| Chain | Residue |
| E | HOH525 |
| F | HIS194 |
| F | HIS212 |
| F | HOH490 |
| F | HOH503 |
| F | HOH544 |
| site_id | AD3 |
| Number of Residues | 7 |
| Details | binding site for residue NI F 302 |
| Chain | Residue |
| F | HIS200 |
| F | HOH402 |
| F | HOH491 |
| F | HOH537 |
| F | HOH538 |
| F | HOH549 |
| F | HOH557 |
| site_id | AD4 |
| Number of Residues | 6 |
| Details | binding site for residue NI G 301 |
| Chain | Residue |
| G | HIS194 |
| G | HIS212 |
| G | HOH517 |
| G | HOH530 |
| G | HOH531 |
| G | HOH536 |
| site_id | AD5 |
| Number of Residues | 4 |
| Details | binding site for residue NI G 302 |
| Chain | Residue |
| G | HIS200 |
| G | HOH479 |
| G | HOH537 |
| G | HOH542 |
| site_id | AD6 |
| Number of Residues | 6 |
| Details | binding site for residue NI H 301 |
| Chain | Residue |
| H | HIS194 |
| H | HIS212 |
| H | HOH467 |
| H | HOH525 |
| H | HOH528 |
| H | HOH536 |
| site_id | AD7 |
| Number of Residues | 6 |
| Details | binding site for residue NI H 302 |
| Chain | Residue |
| H | HIS200 |
| H | HOH405 |
| H | HOH499 |
| H | HOH530 |
| H | HOH532 |
| H | HOH546 |
| site_id | AD8 |
| Number of Residues | 6 |
| Details | binding site for residue NI I 301 |
| Chain | Residue |
| I | HOH520 |
| I | HOH536 |
| I | HIS194 |
| I | HIS212 |
| I | HOH503 |
| I | HOH514 |
| site_id | AD9 |
| Number of Residues | 5 |
| Details | binding site for residue NI I 302 |
| Chain | Residue |
| I | HIS200 |
| I | HOH410 |
| I | HOH522 |
| I | HOH532 |
| I | HOH542 |
| site_id | AE1 |
| Number of Residues | 6 |
| Details | binding site for residue NI J 301 |
| Chain | Residue |
| J | HIS194 |
| J | HIS212 |
| J | HOH470 |
| J | HOH494 |
| J | HOH522 |
| J | HOH531 |
| site_id | AE2 |
| Number of Residues | 5 |
| Details | binding site for residue NI J 302 |
| Chain | Residue |
| J | HIS200 |
| J | HOH458 |
| J | HOH520 |
| J | HOH525 |
| J | HOH532 |
| site_id | AE3 |
| Number of Residues | 7 |
| Details | binding site for residue NI K 301 |
| Chain | Residue |
| K | HIS194 |
| K | HIS212 |
| K | HOH497 |
| K | HOH512 |
| K | HOH515 |
| K | HOH523 |
| K | HOH572 |
| site_id | AE4 |
| Number of Residues | 5 |
| Details | binding site for residue NI K 302 |
| Chain | Residue |
| K | HIS200 |
| K | HOH410 |
| K | HOH534 |
| K | HOH546 |
| K | HOH549 |
| site_id | AE5 |
| Number of Residues | 6 |
| Details | binding site for residue NI K 303 |
| Chain | Residue |
| K | ASN208 |
| K | HIS210 |
| K | HOH501 |
| K | HOH542 |
| K | HOH543 |
| K | HOH545 |
| site_id | AE6 |
| Number of Residues | 7 |
| Details | binding site for residue NI L 301 |
| Chain | Residue |
| L | HIS194 |
| L | HIS212 |
| L | HOH496 |
| L | HOH524 |
| L | HOH534 |
| L | HOH539 |
| L | HOH571 |
| site_id | AE7 |
| Number of Residues | 7 |
| Details | binding site for residue NI L 302 |
| Chain | Residue |
| G | HOH532 |
| G | HOH544 |
| L | HIS200 |
| L | HOH459 |
| L | HOH533 |
| L | HOH536 |
| L | HOH543 |
| site_id | AE8 |
| Number of Residues | 24 |
| Details | binding site for Di-peptide PHE B 61 and GYS B 62 |
| Chain | Residue |
| B | LEU12 |
| B | MET14 |
| B | ILE25 |
| B | GLN38 |
| B | MET40 |
| B | LEU42 |
| B | TYR54 |
| B | LEU57 |
| B | THR58 |
| B | THR59 |
| B | VAL60 |
| B | ASN65 |
| B | ARG66 |
| B | TRP89 |
| B | ARG91 |
| B | ASN105 |
| B | TYR116 |
| B | SER142 |
| B | MET159 |
| B | HIS193 |
| B | ILE195 |
| B | GLU211 |
| B | HOH412 |
| B | HOH416 |
| site_id | AE9 |
| Number of Residues | 20 |
| Details | binding site for Di-peptide GYS B 62 and ASN B 65 |
| Chain | Residue |
| B | GLN38 |
| B | THR58 |
| B | THR59 |
| B | VAL60 |
| B | PHE61 |
| B | ARG66 |
| B | VAL67 |
| B | PHE68 |
| B | TYR87 |
| B | TRP89 |
| B | ARG91 |
| B | ASN105 |
| B | TYR116 |
| B | SER142 |
| B | MET159 |
| B | HIS193 |
| B | ILE195 |
| B | GLU211 |
| B | HOH412 |
| B | HOH433 |
