Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HRB

The crystal structure of AsfvPolX:DNA1 binary complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006259biological_processDNA metabolic process
A0006281biological_processDNA repair
A0006303biological_processdouble-strand break repair via nonhomologous end joining
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0044423cellular_componentvirion component
A0046872molecular_functionmetal ion binding
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MN A 201
ChainResidue
AASP49
AASP51
AASP100
DDC8
DDC9

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 202
ChainResidue
AASN68
AHOH348
AASN23
AGLN25
ALYS63
AHIS64

site_idAC3
Number of Residues6
Detailsbinding site for residue BME A 203
ChainResidue
AILE27
ALYS28
ALEU30
AHOH307
AHOH368
AHOH433

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GSLrREekmLnDVDLLIivP
ChainResidueDetails
AGLY38-PRO57

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:11685239, ECO:0000305|PubMed:28245220
ChainResidueDetails
AASP49
AASP51
AASP100

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Stabilizes dGTP in a syn confromation to overcome the Watson-Crick base pairing constraint => ECO:0000269|PubMed:24617852
ChainResidueDetails
AHIS115

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon