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5HN4

Crystal structure of beta-decarboxylating dehydrogenase (TK0280) from Thermococcus kodakarensis complexed with Mn and homoisocitrate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003862molecular_function3-isopropylmalate dehydrogenase activity
A0004449molecular_functionisocitrate dehydrogenase (NAD+) activity
A0006099biological_processtricarboxylic acid cycle
A0006102biological_processisocitrate metabolic process
A0009098biological_processL-leucine biosynthetic process
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0046872molecular_functionmetal ion binding
A0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 48Y A 401
ChainResidue
ATHR71
AASP218
AMN402
AHOH504
AHOH511
ASER80
AARG86
AARG96
AARG111
ATYR118
ALYS163
AASN165
AASP194

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 402
ChainResidue
AASP194
AASP218
A48Y401
AHOH504
AHOH511

site_idAC3
Number of Residues3
Detailsbinding site for residue IMD A 403
ChainResidue
AASP222
AILE231
AHOH511

site_idAC4
Number of Residues5
Detailsbinding site for residue IPA A 404
ChainResidue
ASER230
AGLY232
AILE256
AASN263
AASP301

Functional Information from PROSITE/UniProt
site_idPS00470
Number of Residues20
DetailsIDH_IMDH Isocitrate and isopropylmalate dehydrogenases signature. NLFGDIlSDl.AtvhaGSIGI
ChainResidueDetails
AASN214-ILE233

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PDB entries from 2024-10-16

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