Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HN2

Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NA F 101
ChainResidue
EHOH111
EHOH136
FHOH208
FHOH218
FHOH224

site_idAC2
Number of Residues21
Detailsbinding site for Di-nucleotide A B 3 and RSQ B 4
ChainResidue
BU2
BG5
BHOH101
BHOH103
BHOH107
BHOH108
BHOH110
BHOH111
BHOH113
BHOH114
BHOH117
BHOH119
DA3
DRSQ4
DHOH101
FRSQ4
FHOH216
AG5
AU6
AA7
AHOH107

site_idAC3
Number of Residues17
Detailsbinding site for Di-nucleotide RSQ B 4 and G B 5
ChainResidue
ARSQ4
AG5
AHOH107
BA3
BU6
BHOH102
BHOH103
BHOH109
BHOH110
BHOH114
BHOH117
BHOH119
DA3
DRSQ4
DHOH101
EHOH142
FRSQ4

site_idAC4
Number of Residues10
Detailsbinding site for Di-nucleotide A C 3 and RSQ C 4
ChainResidue
AHOH130
AHOH131
CU2
CG5
CHOH108
CHOH116
DG5
DU6
DA7
FHOH237

site_idAC5
Number of Residues13
Detailsbinding site for Di-nucleotide RSQ C 4 and G C 5
ChainResidue
CA3
CU6
CHOH102
CHOH106
CHOH108
CHOH109
CHOH113
CHOH116
DA3
DRSQ4
DG5
EHOH149
FHOH237

site_idAC6
Number of Residues18
Detailsbinding site for Di-nucleotide A D 3 and RSQ D 4
ChainResidue
BRSQ4
BHOH110
CG5
CU6
CA7
DU2
DG5
DHOH101
DHOH102
DHOH103
DHOH104
DHOH109
DHOH112
DHOH115
DHOH116
FA3
FRSQ4
FHOH216

site_idAC7
Number of Residues18
Detailsbinding site for Di-nucleotide RSQ D 4 and G D 5
ChainResidue
FA3
FRSQ4
FHOH240
BRSQ4
BHOH110
CA3
CRSQ4
CG5
CU6
DA3
DU6
DHOH102
DHOH106
DHOH109
DHOH110
DHOH114
DHOH116
EHOH127

site_idAC8
Number of Residues15
Detailsbinding site for Di-nucleotide A E 3 and RSQ E 4
ChainResidue
EU2
EG5
EHOH103
EHOH105
EHOH107
EHOH108
EHOH118
EHOH120
EHOH122
EHOH125
EHOH129
FG5
FU6
FA7
FHOH225

site_idAC9
Number of Residues17
Detailsbinding site for Di-nucleotide RSQ E 4 and G E 5
ChainResidue
EA3
EU6
EHOH101
EHOH103
EHOH105
EHOH108
EHOH116
EHOH118
EHOH121
EHOH122
EHOH131
EHOH132
FA3
FRSQ4
FG5
FU6
FHOH225

site_idAD1
Number of Residues21
Detailsbinding site for Di-nucleotide A F 3 and RSQ F 4
ChainResidue
BA3
BRSQ4
BHOH101
BHOH110
BHOH114
DRSQ4
DHOH102
EG5
EU6
EA7
FU2
FG5
FHOH202
FHOH207
FHOH209
FHOH214
FHOH215
FHOH216
FHOH217
FHOH220
FHOH223

site_idAD2
Number of Residues20
Detailsbinding site for Di-nucleotide RSQ F 4 and G F 5
ChainResidue
BA3
BRSQ4
BHOH101
BHOH110
BHOH114
DRSQ4
EA3
ERSQ4
EG5
FA3
FU6
FHOH202
FHOH204
FHOH210
FHOH214
FHOH219
FHOH220
FHOH221
FHOH223
FHOH228

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon